BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC3ZG01RM1.SCF screened BAC_end (900 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1750 1275 0.0 >3x_Contig1750 Length = 14427 Score = 1275 bits (643), Expect = 0.0 Identities = 723/743 (97%), Gaps = 5/743 (0%) Strand = Plus / Plus Query: 80 cttatccgggggtgaaaaa-tggactaaaaaagct-ttatcgatgaattaaaagttgcag 137 ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| Sbjct: 12183 cttatccgggggtgaaaaagtggactaaaaaagctattatcgatgaattaaaagttgcag 12242 Query: 138 gatctggtccaatatttgtgggtactgttgaagaggtagctgatacaattcaagaatggg 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12243 gatctggtccaatatttgtgggtactgttgaagaggtagctgatacaattcaagaatggg 12302 Query: 198 tttcatacgctgacgttgatggatttaatttgtcatatacttcgatttttttt-cttatg 256 ||||||||||||||||||||||||||||||||||||||||||||||| | | |||| Sbjct: 12303 tttcatacgctgacgttgatggatttaatttgtcatatacttcgattccaagtacgtatg 12362 Query: 257 aaaaaatcgttgacgaactattacctgaactcagaaaacgtggactggtccaggacgact 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12363 aaaaaatcgttgacgaactattacctgaactcagaaaacgtggactggtccaggacgact 12422 Query: 317 atcctgaaccaaagagctcacaaaagcttactttcagagagcaacttttcggtgacaacg 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12423 atcctgaaccaaagagctcacaaaagcttactttcagagagcaacttttcggtgacaacg 12482 Query: 377 atttggacgtcactcatcctgctcacgacttaaggtggagagagaatgaaacaaagtccg 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12483 atttggacgtcactcatcctgctcacgacttaaggtggagagagaatgaaacaaagtccg 12542 Query: 437 aattcgaatccaggttgccaggtgccttggaaaaattaaaagggtttaactgactcgtag 496 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12543 aattcgaatccaggttgccaggtgccttggaaaaattaaaagggtttaactgactcgtag 12602 Query: 497 ccgaattataaactttacctttttgatggagcgtgtgtaagacatagatatctcaccctg 556 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12603 ccgaattataaactttacctttttgatggagcgtgtgtaagacatagatatctcaccctg 12662 Query: 557 ctatcataccgcagatacacaaaccaaaaaatgattgctactcaatccactagtatatac 616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12663 ctatcataccgcagatacacaaaccaaaaaatgattgctactcaatccactagtatatac 12722 Query: 617 ttggatatttactagcccaaatgaagcaatatctcgtgtgaagctattctcaattgtgaa 676 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12723 ttggatatttactagcccaaatgaagcaatatctcgtgtgaagctattctcaattgtgaa 12782 Query: 677 tttaagtggacttatcattcattcctccagcattcaataagagatgttgtcgaacatgat 736 ||||||||||||||||| |||||||||||||| |||| ||||||||||| |||||| ||| Sbjct: 12783 tttaagtggacttatcagtcattcctccagcaatcaagaagagatgttgccgaacaggat 12842 Query: 737 attttcgtgcaacacctgaaataccgaaaaaaaactaactctcacaaaagacaacataag 796 | || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 12843 a-ttccgtgcaacacctgaaataccgaaaaaaaactaactctcacaaaagacaacaaaag 12901 Query: 797 acaacataatgatcttttcaaat 819 |||||| || |||||| |||||| Sbjct: 12902 acaaca-aaagatcttatcaaat 12923 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6853 Number of Sequences: 1807 Number of extensions: 6853 Number of successful extensions: 30 Number of sequences better than 1.0e-20: 1 length of query: 900 length of database: 10,358,551 effective HSP length: 16 effective length of query: 884 effective length of database: 10,329,639 effective search space: 9131400876 effective search space used: 9131400876 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)