BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC3ZG01RM1.SCF screened BAC_end
         (900 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1750                                                        1275   0.0  

>3x_Contig1750 
          Length = 14427

 Score = 1275 bits (643), Expect = 0.0
 Identities = 723/743 (97%), Gaps = 5/743 (0%)
 Strand = Plus / Plus

                                                                         
Query: 80    cttatccgggggtgaaaaa-tggactaaaaaagct-ttatcgatgaattaaaagttgcag 137
             ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 12183 cttatccgggggtgaaaaagtggactaaaaaagctattatcgatgaattaaaagttgcag 12242

                                                                         
Query: 138   gatctggtccaatatttgtgggtactgttgaagaggtagctgatacaattcaagaatggg 197
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12243 gatctggtccaatatttgtgggtactgttgaagaggtagctgatacaattcaagaatggg 12302

                                                                         
Query: 198   tttcatacgctgacgttgatggatttaatttgtcatatacttcgatttttttt-cttatg 256
             |||||||||||||||||||||||||||||||||||||||||||||||     | | ||||
Sbjct: 12303 tttcatacgctgacgttgatggatttaatttgtcatatacttcgattccaagtacgtatg 12362

                                                                         
Query: 257   aaaaaatcgttgacgaactattacctgaactcagaaaacgtggactggtccaggacgact 316
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12363 aaaaaatcgttgacgaactattacctgaactcagaaaacgtggactggtccaggacgact 12422

                                                                         
Query: 317   atcctgaaccaaagagctcacaaaagcttactttcagagagcaacttttcggtgacaacg 376
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12423 atcctgaaccaaagagctcacaaaagcttactttcagagagcaacttttcggtgacaacg 12482

                                                                         
Query: 377   atttggacgtcactcatcctgctcacgacttaaggtggagagagaatgaaacaaagtccg 436
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12483 atttggacgtcactcatcctgctcacgacttaaggtggagagagaatgaaacaaagtccg 12542

                                                                         
Query: 437   aattcgaatccaggttgccaggtgccttggaaaaattaaaagggtttaactgactcgtag 496
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12543 aattcgaatccaggttgccaggtgccttggaaaaattaaaagggtttaactgactcgtag 12602

                                                                         
Query: 497   ccgaattataaactttacctttttgatggagcgtgtgtaagacatagatatctcaccctg 556
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12603 ccgaattataaactttacctttttgatggagcgtgtgtaagacatagatatctcaccctg 12662

                                                                         
Query: 557   ctatcataccgcagatacacaaaccaaaaaatgattgctactcaatccactagtatatac 616
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12663 ctatcataccgcagatacacaaaccaaaaaatgattgctactcaatccactagtatatac 12722

                                                                         
Query: 617   ttggatatttactagcccaaatgaagcaatatctcgtgtgaagctattctcaattgtgaa 676
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12723 ttggatatttactagcccaaatgaagcaatatctcgtgtgaagctattctcaattgtgaa 12782

                                                                         
Query: 677   tttaagtggacttatcattcattcctccagcattcaataagagatgttgtcgaacatgat 736
             ||||||||||||||||| |||||||||||||| |||| ||||||||||| |||||| |||
Sbjct: 12783 tttaagtggacttatcagtcattcctccagcaatcaagaagagatgttgccgaacaggat 12842

                                                                         
Query: 737   attttcgtgcaacacctgaaataccgaaaaaaaactaactctcacaaaagacaacataag 796
             | || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 12843 a-ttccgtgcaacacctgaaataccgaaaaaaaactaactctcacaaaagacaacaaaag 12901

                                    
Query: 797   acaacataatgatcttttcaaat 819
             |||||| || |||||| ||||||
Sbjct: 12902 acaaca-aaagatcttatcaaat 12923


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6853
Number of Sequences: 1807
Number of extensions: 6853
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 900
length of database: 10,358,551
effective HSP length: 16
effective length of query: 884
effective length of database: 10,329,639
effective search space: 9131400876
effective search space used: 9131400876
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)