BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC3ZG04RM1.SCF screened BAC_end (871 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1525 1507 0.0 >3x_Contig1525 Length = 8924 Score = 1507 bits (760), Expect = 0.0 Identities = 796/807 (98%), Gaps = 1/807 (0%) Strand = Plus / Minus Query: 49 gcgtgttttacagactgtgaacatgaaacatagagctttatcgaattataaaggtggtag 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8906 gcgtgttttacagactgtgaacatgaaacatagagctttatcgaattataaaggtggtag 8847 Query: 109 attgtcgagtagaacagtcatcatgtaataccacacaagataggtctttgtatcagtaat 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8846 attgtcgagtagaacagtcatcatgtaataccacacaagataggtctttgtatcagtaat 8787 Query: 169 tgtcttataatatcggaatcctgtaactattaaataactactctataaactaatgtcact 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8786 tgtcttataatatcggaatcctgtaactattaaataactactctataaactaatgtcact 8727 Query: 229 tgtatgcatgaaggaatccctggggtgatcccctgaaaaaagccgccagtatgagcctct 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8726 tgtatgcatgaaggaatccctggggtgatcccctgaaaaaagccgccagtatgagcctct 8667 Query: 289 tatccaccatttcctgtattatgtcgttggcattgtactcaggaccataatgttctctat 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8666 tatccaccatttcctgtattatgtcgttggcattgtactcaggaccataatgttctctat 8607 Query: 349 atctttggaataaggagacgtttttgtttttgatttctgtttcactctcagcaattcgag 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8606 atctttggaataaggagacgtttttgtttttgatttctgtttcactctcagcaattcgag 8547 Query: 409 acatgaacggtaaataccatctggaaatgtcttttaatttgtgtgttgctgaaaattcga 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8546 acatgaacggtaaataccatctggaaatgtcttttaatttgtgtgttgctgaaaattcga 8487 Query: 469 gtgccaaattgttaataaaatctagttcaaatgcatcgctgttgtcttctgatttaaggc 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8486 gtgccaaattgttaataaaatctagttcaaatgcatcgctgttgtcttctgatttaaggc 8427 Query: 529 gatagtcttttaaaacgccagtcttccttctggagctacgagtgtttccaagcattgtca 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8426 gatagtcttttaaaacgccagtcttccttctggagctacgagtgtttccaagcattgtca 8367 Query: 589 gaacatttccttgaggtgagttattgactctagtcttgaggtattttatcatctcattaa 648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8366 gaacatttccttgaggtgagttattgactctagtcttgaggtattttatcatctcattaa 8307 Query: 649 cgcaaatactaaccttatcatgggcgacaacattgacgtcttcgttatcattaaaacgta 708 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8306 cgcaaatactaaccttatcatgggcgacaacattgacgtcttcgttatcattaaaacgta 8247 Query: 709 naaactgtttgcattttttctttcattaatgattgcatctgtttttcccatgggaataga 768 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 8246 aaaactgtttgca-tttttcttccattaatgattgcatctgtttttcccatgggaataga 8188 Query: 769 gtgttatgatttatattccaaaggtgcctcacatatttccacacaacgtcataggaagtt 828 |||||||||||||||| |||||||||| |||||| | |||||||||||||||||||||| Sbjct: 8187 gtgttatgatttatatcccaaaggtgctccacatagtcccacacaacgtcataggaagtt 8128 Query: 829 tcttaattattagaaaattgatgcttt 855 |||| || |||||||| |||||||||| Sbjct: 8127 tcttcatcattagaaatttgatgcttt 8101 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6174 Number of Sequences: 1807 Number of extensions: 6174 Number of successful extensions: 32 Number of sequences better than 1.0e-20: 1 length of query: 871 length of database: 10,358,551 effective HSP length: 16 effective length of query: 855 effective length of database: 10,329,639 effective search space: 8831841345 effective search space used: 8831841345 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)