BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC3ZG06RM1.SCF screened BAC_end (891 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig471 1384 0.0 >3x_Contig471 Length = 2964 Score = 1384 bits (698), Expect = 0.0 Identities = 801/829 (96%), Gaps = 5/829 (0%) Strand = Plus / Minus Query: 51 cgttggtgaaagtcgattcaagatcattttcaggttcttctgataaattagtcttgccta 110 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2458 cgttggtgaaagtcgattcaagatcattttcaggttcttctgataaattagtcttgccta 2399 Query: 111 agcgaattttcttcggcagcaggagctgctgattcactgtttgctgcattcttcttcttc 170 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2398 agcgaattttcttcggcagcaggagctgctgattcactgtttgctgcattcttcttcttc 2339 Query: 171 ttcttcttcttgtttttattcttgttgctagacttagaagcaggctcgttcacgtcttga 230 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2338 ttcttcttcttgtttttattcttgttgctagacttagaagcaggctcgttcacgtcttga 2279 Query: 231 gtatcaccttcatgctcggcttcatctttatctttagcctcgtctttggcttcagctgag 290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2278 gtatcaccttcatgctcggcttcatctttatctttagcctcgtctttggcttcagctgag 2219 Query: 291 gcttcagctgaggcttcaggtgtctcttcagcctcttcagccttagtaggttcattttca 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2218 gcttcagctgaggcttcaggtgtctcttcagcctcttcagccttagtaggttcattttca 2159 Query: 351 gctacatcttcagaattttcttcgatgacaggttcactttcttcaatttcttccttgaca 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2158 gctacatcttcagaattttcttcgatgacaggttcactttcttcaatttcttccttgaca 2099 Query: 411 ctttcttcaattacttctttgacaaccggttctgtttcctgagctggctcttcttcctga 470 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2098 ctttcttcaattacttctttgacaaccggttctgtttcctgagctggctcttcttcctga 2039 Query: 471 gctggctcttcttcctgagctggctcttcttcctgagctggctcttcttcctgagctggc 530 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2038 gctggctcttcttcctgagctggctcttcttcctgagctggctcttcttcctgagctggc 1979 Query: 531 tcttcttcttgagctggtttatcctcttnctcggccgaaccctcagaactaacctgctgt 590 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1978 tcttcttcttgagctggtttatcctcttcctcggccgaaccctcagaactaacctgctgt 1919 Query: 591 tcgttcacaggactggtttcaacagcgggatggttcgaatcacccttgtcctccacagga 650 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1918 ccgttcacaggactggtttcaacagcggaatggttcgaatcacccttgtcctccacagga 1859 Query: 651 tccttagcgatgctctcaaattcttttatc-aatcggcaacacccattgtcaaatcttct 709 |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 1858 tccttagcgatgctctcaaatttctttatcaaatcggcaacacccattgtcaaatcttct 1799 Query: 710 attaatgcttgttcgcactgttttgaattcccgtttgaagtaacgactacagacaagcgg 769 ||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 1798 attaatgctgtttcgcactgttttgaatt-ccggttgaagtaacgactacagacaagcgg 1740 Query: 770 atcgacttgagcaagcctgtaatggaccttctctttcgctttttttgttgacagttttgt 829 ||||||| ||| |||||||||| || ||||||| ||| || | |||||||||||||| Sbjct: 1739 atcgactgaggcaggcctgtaatgtacgttctcttcggctcttctcgttgacagttttgt 1680 Query: 830 tggaaaattttattgttctggaatcaaaagaaacattgttaaaaagtaa 878 | ||||||||| ||| |||| ||||||||| |||||| |||||||||| Sbjct: 1679 t-gaaaatttttatgtactgg-atcaaaagagacattg-taaaaagtaa 1634 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 10,070 Number of Sequences: 1807 Number of extensions: 10070 Number of successful extensions: 569 Number of sequences better than 1.0e-20: 1 length of query: 891 length of database: 10,358,551 effective HSP length: 16 effective length of query: 875 effective length of database: 10,329,639 effective search space: 9038434125 effective search space used: 9038434125 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)