BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC3ZG07FM1.SCF screened BAC_end (914 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1770 892 0.0 >3x_Contig1770 Length = 29267 Score = 892 bits (450), Expect = 0.0 Identities = 509/522 (97%), Gaps = 5/522 (0%) Strand = Plus / Minus Query: 95 tcagaatgctgctatggcaactggctgtgagtccaattcacctttattaactgtctttta 154 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14695 tcagaatgctgctatggcaactggctgtgagtccaattcacctttattaactgtctttta 14636 Query: 155 ctgtgatgggttattaaatagatactgtttaagctcaagaatttgtaaacatcaggaaaa 214 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14635 ctgtgatgggttattaaatagatactgtttaagctcaagaatttgtaaacatcaggaaaa 14576 Query: 215 caagtaactaattttgtaacataaagtttaagaatgaaaacaggaacgtgaatcgccgta 274 ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14575 caagtaactaagtttgaaacataaagtttaagaatgaaaacaggaacgtgaatcgccgta 14516 Query: 275 gagcctcgatcaacggtttattaacacctatctgaacatctaaaacacggcgttggaaaa 334 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14515 gagcctcgatcaacggtttattaacacctatctgaacatctaaaacacggcgttggaaaa 14456 Query: 335 ccaaccaacatttataagaatatggctacaaagttagaggcgtttataaacgatctcaga 394 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14455 ccaaccaacatttataagaatatggctacaaagttagaggcgtttataaacgatctcaga 14396 Query: 395 ctacaatgtgaaactaacgatacaacgaagtatgtcagtatcgttcttttctgtgaaaaa 454 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14395 ctacaatgtgaaactaacgatacaacgaagtatgtcagtatcgttcttttctgtgaaaaa 14336 Query: 455 -aaaccactttgaagctgttcttccagtacattgatggcattgatacgaattcagagccc 513 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14335 gaaaccactttgaagctgttcttccagtacattgatggcattgatacgaattcagagccc 14276 Query: 514 aagctttgctg-gctgtcgcctacactcttccccgttggatactattcccaggaaaatac 572 |||| |||||| ||||||||||||||||| |||||||||||||||| || |||||| ||| Sbjct: 14275 aagc-ttgctgtgctgtcgcctacactctcccccgttggatactataccaaggaaattac 14217 Query: 573 cacttgaaaatggatggcaagtaaatacttaatttcacatgc 614 ||| |||| ||||||||||||| |||||||||| |||||||| Sbjct: 14216 cac-tgaagatggatggcaagt-aatacttaatatcacatgc 14177 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,506 Number of Sequences: 1807 Number of extensions: 12506 Number of successful extensions: 93 Number of sequences better than 1.0e-20: 1 length of query: 914 length of database: 10,358,551 effective HSP length: 16 effective length of query: 898 effective length of database: 10,329,639 effective search space: 9276015822 effective search space used: 9276015822 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)