BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC3ZH03FM1.SCF screened BAC_end (948 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1405 759 0.0 >3x_Contig1405 Length = 9155 Score = 759 bits (383), Expect = 0.0 Identities = 444/465 (95%) Strand = Plus / Minus Query: 72 caaacagaaaagaaagacgtactccgaaacctttgagaattgtgatacccttcaatggaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8875 caaacagaaaagaaagacgtactccgaaacctttgagaattgtgatacccttcaatggaa 8816 Query: 132 aaagcctaatgagccaaaatgttccaaaagaatacttttgcttccacttctttaacaaat 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8815 aaagcctaatgagccaaaatgttccaaaagaatacttttgcttccacttctttaacaaat 8756 Query: 192 cactgttgaaaaaatattttgcaggttattcactaagttgtggaaaagaaaactctcttt 251 |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 8755 cactgttgaaaaaagaagttgcaggttattcactaagttgtggaaaagaaaactctcttt 8696 Query: 252 atttcagtatttcagtgttctaacctataaacagattttcttccccatactaagcggtag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8695 atttcagtatttcagtgttctaacctataaacagattttcttccccatactaagcggtag 8636 Query: 312 tataacaaaaaaaaccaaaaactaggaaaaaaaaaagaccattcgctctacttgagtnta 371 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 8635 tataacaaaaaaaaccaaaaactaggaaaaaaaaaagaccattcgctctacttgagttta 8576 Query: 372 acctacaaattttttttttttttagattcatatagattttcatgagctctgatttgatta 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8575 acctacaaattttttttttttttagattcatatagattttcatgagctctgatttgatta 8516 Query: 432 gggacgaaggtttaaggaaaaaagactttcttcgctttaacggccctaaaaaaaaccatt 491 |||||||||||||||||||||| |||||||| |||| ||||||| || |||||| || Sbjct: 8515 gggacgaaggtttaaggaaaaaggactttctcggcttcaacggcctaaagaaaaacaata 8456 Query: 492 ccattgaaactgatttaaaaaaaaaataaaaaanatttaaaaaaa 536 | || |||||||| | |||||||||| |||||| | | ||||||| Sbjct: 8455 caatagaaactgaataaaaaaaaaaaaaaaaaaaaataaaaaaaa 8411 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 22,817 Number of Sequences: 1807 Number of extensions: 22817 Number of successful extensions: 574 Number of sequences better than 1.0e-20: 1 length of query: 948 length of database: 10,358,551 effective HSP length: 16 effective length of query: 932 effective length of database: 10,329,639 effective search space: 9627223548 effective search space used: 9627223548 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)