BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC3ZH03FM1.SCF screened BAC_end
         (948 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1405                                                         759   0.0  

>3x_Contig1405 
          Length = 9155

 Score =  759 bits (383), Expect = 0.0
 Identities = 444/465 (95%)
 Strand = Plus / Minus

                                                                        
Query: 72   caaacagaaaagaaagacgtactccgaaacctttgagaattgtgatacccttcaatggaa 131
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8875 caaacagaaaagaaagacgtactccgaaacctttgagaattgtgatacccttcaatggaa 8816

                                                                        
Query: 132  aaagcctaatgagccaaaatgttccaaaagaatacttttgcttccacttctttaacaaat 191
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8815 aaagcctaatgagccaaaatgttccaaaagaatacttttgcttccacttctttaacaaat 8756

                                                                        
Query: 192  cactgttgaaaaaatattttgcaggttattcactaagttgtggaaaagaaaactctcttt 251
            |||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8755 cactgttgaaaaaagaagttgcaggttattcactaagttgtggaaaagaaaactctcttt 8696

                                                                        
Query: 252  atttcagtatttcagtgttctaacctataaacagattttcttccccatactaagcggtag 311
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8695 atttcagtatttcagtgttctaacctataaacagattttcttccccatactaagcggtag 8636

                                                                        
Query: 312  tataacaaaaaaaaccaaaaactaggaaaaaaaaaagaccattcgctctacttgagtnta 371
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 8635 tataacaaaaaaaaccaaaaactaggaaaaaaaaaagaccattcgctctacttgagttta 8576

                                                                        
Query: 372  acctacaaattttttttttttttagattcatatagattttcatgagctctgatttgatta 431
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8575 acctacaaattttttttttttttagattcatatagattttcatgagctctgatttgatta 8516

                                                                        
Query: 432  gggacgaaggtttaaggaaaaaagactttcttcgctttaacggccctaaaaaaaaccatt 491
            |||||||||||||||||||||| ||||||||  |||| |||||||  || |||||| || 
Sbjct: 8515 gggacgaaggtttaaggaaaaaggactttctcggcttcaacggcctaaagaaaaacaata 8456

                                                         
Query: 492  ccattgaaactgatttaaaaaaaaaataaaaaanatttaaaaaaa 536
            | || |||||||| | |||||||||| |||||| | | |||||||
Sbjct: 8455 caatagaaactgaataaaaaaaaaaaaaaaaaaaaataaaaaaaa 8411


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 22,817
Number of Sequences: 1807
Number of extensions: 22817
Number of successful extensions: 574
Number of sequences better than 1.0e-20: 1
length of query: 948
length of database: 10,358,551
effective HSP length: 16
effective length of query: 932
effective length of database: 10,329,639
effective search space: 9627223548
effective search space used: 9627223548
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)