BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC3ZH05FM1.SCF screened BAC_end (920 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig929 1174 0.0 >3x_Contig929 Length = 3696 Score = 1174 bits (592), Expect = 0.0 Identities = 600/603 (99%) Strand = Plus / Plus Query: 88 ttcaaagaccttgaccttttaattggtttccttgaattcactttagagggagaagaagtc 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3080 ttcaaagaccttgaccttttaattggtttccttgaattcactttagagggagaagaagtc 3139 Query: 148 tacgatcctgaaattgtaaaaaatattttcaaactgatggtgcatattgaaaggttgaat 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3140 tacgatcctgaaattgtaaaaaatattttcaaactgatggtgcatattgaaaggttgaat 3199 Query: 208 attaatataccttattccaaggaagcaatgcacaagttaggactgaattgggatgacttc 267 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3200 attaatataccttacaccaaggaagcaatgcacaagttaggactgaattgggatgacttc 3259 Query: 268 attgatacagaatatttcctacagagcataacaaaaatgaaaagaagacttcatgaactg 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3260 attgatacagaatatttcctacagagcataacaaaaatgaaaagaagacttcatgaactg 3319 Query: 328 aagtcttctcgctctcctgctgatatgtccaggatattgcaaagtcttgattgccttgtc 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3320 aagtcttctcgctctcctgctgatatgtccaggatattgcaaagtcttgattgccttgtc 3379 Query: 388 tttttcatagaaaagtatcatgaggataaacagtataaagtgcccacaatgcattccaaa 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3380 tttttcatagaaaagtatcatgaggataaacagtataaagtgcccacaatgcattccaaa 3439 Query: 448 gaaagggaagaagtgtgccattcagcacatatacttcactcttctggcattttactgctt 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3440 gaaagggaagaagtgtgccattcagcacatatacttcactcttctggcattttactgctt 3499 Query: 508 tactgctacgaatctttaaccaaattaggtttcgactggcagtattatcccgaggaatcg 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3500 tactgctacgaatctttaaccaaattaggtttcgactggcagtattatcccgaggaatcg 3559 Query: 568 ctaaaagttattgaacttgccaaagatatgcttcanaaagattcctcgaaaacaattcat 627 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 3560 ctaaaagttattgaacttgccaaagatatgcttcaaaaagattcctcgaaaacaattcat 3619 Query: 628 gaaaaggccaatattttaactttgatacaaaccttagaaaaaggaatcattagggcaatg 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3620 gaaaaggccaatattttaactttgatacaaaccttagaaaaaggaatcattagggcaatg 3679 Query: 688 gat 690 ||| Sbjct: 3680 gat 3682 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7509 Number of Sequences: 1807 Number of extensions: 7509 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 920 length of database: 10,358,551 effective HSP length: 16 effective length of query: 904 effective length of database: 10,329,639 effective search space: 9337993656 effective search space used: 9337993656 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)