BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC40ZA04FM1.SCF screened BAC_end
         (966 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig763                                                         1160   0.0  

>3x_Contig763 
          Length = 2933

 Score = 1160 bits (585), Expect = 0.0
 Identities = 674/697 (96%), Gaps = 5/697 (0%)
 Strand = Plus / Minus

                                                                        
Query: 87   ttgattgatcaccctttttgattttccttatgctaattgttcttaaatagttttgtattt 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2625 ttgattgatcaccctttttgattttccttatgctaattgttcttaaatagttttgtattt 2566

                                                                        
Query: 147  gtattcatatttgtgtattcatattacgacaaatttagttcgagatcttcaatagcagaa 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2565 gtattcatatttgtgtattcatattacgacaaatttagttcgagatcttcaatagcagaa 2506

                                                                        
Query: 207  aatattgacaaacttatgaagtgacgaggaaatgttactattttgtctaactaaactaaa 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2505 aatattgacaaacttatgaagtgacgaggaaatgttactattttgtctaactaaactaaa 2446

                                                                        
Query: 267  gtgattattaagaaatgtgagtgtataaaaagagttcatgaagatgaacaggatagacct 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2445 gtgattattaagaaatgtgagtgtataaaaagagttcatgaagatgaacaggatagacct 2386

                                                                        
Query: 327  gtcgataacagtcaacttgagagacctgaaaaatctgaaaaaatgatagactagaaatag 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2385 gtcgataacagtcaacttgagagacctgaaaaatctgaaaaaatgatagactagaaatag 2326

                                                                        
Query: 387  aaaagaggacaattcttgttttaaaattgagaatgttaataatatgatatgattattatg 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2325 aaaagaggacaattcttgttttaaaattgagaatgttaataatatgatatgattattatg 2266

                                                                        
Query: 447  atagtaatgcattagacttgattactgaagtttgccaacgaatgtcttagctccatctgt 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2265 atagtaatgcattagacttgattactgaagtttgccaacgaatgtcttagctccatctgt 2206

                                                                        
Query: 507  ttctcagagggggaaaaaaggctaaccaaaaaaaaagtatctattgtagacaagtttcac 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2205 ttctcagagggggaaaaaaggctaaccaaaaaaaaagtatctattgtagacaagtttcac 2146

                                                                        
Query: 567  tgttgcactgagcattttcgtcaatggtacattcagtcaagtttgtagttgagccataga 626
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2145 tgttgcactgagcattttcgtcaatggtacatccagtcaagtttgtagttgagccataga 2086

                                                                        
Query: 627  caccaccacccggcatttctgctgaatcgacgggcgatatttttagtgactgcacctgat 686
            |||||||| |||||| |||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 2085 caccacca-ccggcaattctgctgaatcgacgggcgatatcttcagtgactgcacctgat 2027

                                                                        
Query: 687  cccaccaatttcgggttgttcagtagccgagtggatacccttttcttgggaagatgggcc 746
            || || || ||| |||||| ||||||| ||||| ||| || | |||  ||||||| || |
Sbjct: 2026 ccaacgaa-ttctggttgtacagtagcagagtgaata-ccatatctgtggaagat-ggac 1970

                                                 
Query: 747  ctaataccttgggccatggtcataaaattcttcaggg 783
            |||||| ||||||| ||| |||| |||||||||||||
Sbjct: 1969 ctaataacttgggcaatgttcat-aaattcttcaggg 1934


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7693
Number of Sequences: 1807
Number of extensions: 7693
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 966
length of database: 10,358,551
effective HSP length: 16
effective length of query: 950
effective length of database: 10,329,639
effective search space: 9813157050
effective search space used: 9813157050
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)