BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC40ZA09FM1.SCF screened BAC_end (984 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1787 1156 0.0 >3x_Contig1787 Length = 34189 Score = 1156 bits (583), Expect = 0.0 Identities = 666/687 (96%), Gaps = 5/687 (0%) Strand = Plus / Plus Query: 84 tgcaaaccgattcttgaagttagtggaacaataggggcatatcatctcaaagttcttgat 143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25526 tgcaaaccgattcttgaagttagtggaacaataggggcatatcatctcaaagttcttgat 25585 Query: 144 atacctttcggatagctccttgtcaccaggcaagtccaacacaggtagttcatcccatgg 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25586 atacctttcggatagctccttgtcaccaggcaagtccaacacaggtagttcatcccatgg 25645 Query: 204 tataaagaacggggttttgaaagagttgaaatgctttttgtgctttaatttcttactatg 263 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25646 tataaagaacggggagttgaaagagttgaaatgctttttgtgctttaatttcttactatg 25705 Query: 264 gaaatctcttgtcatgacatgtatatgtgtattagccattgatggagtgctatgtactcc 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25706 gaaatctcttgtcatgacatgtatatgtgtattagccattgatggagtgctatgtactcc 25765 Query: 324 tgattggacaaaattcgccaagaaagcttctttctctttcaaggatatatcttttatgtc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25766 tgattggacaaaattcgccaagaaagcttctttctctttcaaggatatatcttttatgtc 25825 Query: 384 atatttttttatgaattgagtccaacagaatcgtttagcccaatcaatatgccattgaag 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25826 atatttttttatgaattgagtccaacagaatcgtttagcccaatcaatatgccattgaag 25885 Query: 444 ctgcaccttgatgccattgtcgattgtggtgggatgagaattgctgatcttatgacttct 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25886 ctgcaccttgatgccattgtcgattgtggtgggatgagaattgctgatcttatgacttct 25945 Query: 504 tggcaaaactaaaaaatgtttcttcagatttagggaacttatcatgtataatggtcgcta 563 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 25946 tggcaaaactaaaaaatg-ttcttcagatttagggaacttatcatgtataatggtcgcta 26004 Query: 564 tgtcgtcaaagtagagtacttcaaggcatcgttctggac-caaaacgtacggtctgagac 622 ||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||| Sbjct: 26005 tgtcgtcaaagtagagtacttcaggcaatcgttctggacacaaaacgtacggtctgagac 26064 Query: 623 ctatgctgaacgagttcttcctgtttttctcgtcaccatggggcgtttgggacataaagt 682 |||||||||||||||||| |||||||||||||||||||| |||||||||| |||| |||| Sbjct: 26065 ctatgctgaacgagttctccctgtttttctcgtcaccat-gggcgtttggtacat-aagt 26122 Query: 683 gggtttgaaaattcgcagatacggattataagtcattccaattgggaatttggggatgga 742 |||||||||||| |||||||| ||||||||||||||||| ||| | ||||| ||||||| Sbjct: 26123 gggtttgaaaatctgcagatactgattataagtcattccagttgtg-atttgtggatgga 26181 Query: 743 ttttgttcttatgaaaaccatttaaat 769 |||||||| |||| |||||| |||||| Sbjct: 26182 ttttgttcatatggaaaccaattaaat 26208 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7749 Number of Sequences: 1807 Number of extensions: 7749 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 984 length of database: 10,358,551 effective HSP length: 16 effective length of query: 968 effective length of database: 10,329,639 effective search space: 9999090552 effective search space used: 9999090552 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)