BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC40ZA09RM1.SCF screened BAC_end (959 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1730 1370 0.0 >3x_Contig1730 Length = 17223 Score = 1370 bits (691), Expect = 0.0 Identities = 811/848 (95%), Gaps = 3/848 (0%) Strand = Plus / Minus Query: 45 cttaagataaggtttggtacaatggcaataacaaaacacacacctaatcggaaaagagag 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8873 cttaagataaggtttggtacaatggcaataacaaaacacacacctaatcggaaaagagag 8814 Query: 105 acttgtcttaatctgatcaatgcagaatcactaacaaaatagcaaatacacttaaaaaat 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8813 acttgtcttaatctgatcaatgcagaatcactaacaaaatagcaaatacacttaaaaaat 8754 Query: 165 acaaataagctaacgtagaacgaaagcttcttttcctgtaaattacaaatttatttctta 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8753 acaaataagctaacgtagaacgaaagcttcttttcctgtaaattacaaatttatttctta 8694 Query: 225 aaggtgtggaaatattgaaagttcaataaattttcaattttttttccttcctttacctat 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8693 aaggtgtggaaatattgaaagttcaataaattttcaattttttttccttcctttacctat 8634 Query: 285 attttttcaaaactttctctgtttttgatcggatcctccctcctatgtgttcttctttgt 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8633 attttttcaaaactttctctgtttttgatcggatcctccctcctatgtgttcttctttgt 8574 Query: 345 ctctgtttcgtttctgctcttgtgttcttgttccggccaaagaggtcncaaaaaaaaaaa 404 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 8573 ctctgtttcgtttctgctcttgtgttcttgttccggccaaagaggtccaaaaaaaaa-aa 8515 Query: 405 aaaaaaacacgatctaagttcctcagtagtcgtaggaaacgatgacgtgttttcattggt 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8514 aaaaaaacacgatctaagttcctcagtagtcgtaggaaacgatgacgtgttttcattggt 8455 Query: 465 tgcgagtcacgtggaaattaaacactatgncttcacttttaatagatatatttgacctta 524 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 8454 tgcgagtcacgtggaaattaaacactatgctttcacttttaatagatatatttgacctta 8395 Query: 525 atagacgctatgaggcttctt-aaagtaatttgtattggatatttggtgcatcgagagtt 583 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 8394 atagacgctatgaggcttcttaaaagtaatttgtattggatatttggtgcatcgagagtt 8335 Query: 584 tgagactaagattcgctatcttacattcacgtgatttaataatagcacgtgatctatata 643 ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 8334 tgagactaagaatcgctatcttacaatcacgtgatttaataatagcacgtgatctatata 8275 Query: 644 ttgtcctcttctttttgaagatcccgaaagggtatctggagtttcttttttgtagttgaa 703 || ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 8274 ttttcctcttctttttgaagatccgaaaaggtaatctggagtttcttttttgtagttgaa 8215 Query: 704 aaattcangaaaagtgatcgttgagagatgagacgagatgagatgagatgagagactctt 763 ||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 8214 aaattcaagaaagttgatgtttgagagatgagacgagatgagatgagatgagagactctt 8155 Query: 764 atttggataaatcagctgtactcaatattgagttgtaagtgaagacgggggaattacacg 823 || |||||||||||||||||||||||| |||||||||||||| ||| || ||| |||||| Sbjct: 8154 atatggataaatcagctgtactcaatagtgagttgtaagtgaggac-ggtgaagtacacg 8096 Query: 824 taaattccacgcagataaatggggttaaaaggttttggccgaacaaaatggagactttgc 883 |||| | ||||||||| || |||| ||||| |||||||||||||| | |||| |||| Sbjct: 8095 taaaatacacgcagattaaatgggtaaaaagtctttggccgaacaaatcgcagacattgc 8036 Query: 884 gattaaac 891 || ||||| Sbjct: 8035 gaataaac 8028 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 22,108 Number of Sequences: 1807 Number of extensions: 22108 Number of successful extensions: 3509 Number of sequences better than 1.0e-20: 1 length of query: 959 length of database: 10,358,551 effective HSP length: 16 effective length of query: 943 effective length of database: 10,329,639 effective search space: 9740849577 effective search space used: 9740849577 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)