BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC40ZA10FM1.SCF screened BAC_end (986 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1771 886 0.0 >3x_Contig1771 Length = 25932 Score = 886 bits (447), Expect = 0.0 Identities = 479/487 (98%), Gaps = 2/487 (0%) Strand = Plus / Plus Query: 87 tagcgtcgtatttacaacagaaaacatggcctgtagcgatagcgcaaactacaattggct 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14519 tagcgtcgtatttacaacagaaaacatggcctgtagcgatagcgcaaactacaattggct 14578 Query: 147 gctcaggatggcatgcaacgtgaattaacggctcatcgaatacaaactccaatattggag 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14579 gctcaggatggcatgcaacgtgaattaacggctcatcgaatacaaactccaatattggag 14638 Query: 207 aacttttggaggccaacacctccaaagaagcagcgcgcttctttgccttcgtatttttac 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14639 aacttttggaggccaacacctccaaagaagcagcgcgcttctttgccttcgtatttttac 14698 Query: 267 ccatttaatatgactcacctagtgatatactgtattgagcaatagtaatcactaggtttt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14699 ccatttaatatgactcacctagtgatatactgtattgagcaatagtaatcactaggtttt 14758 Query: 327 caggctaaagaaatgatataattcgttccactccaacagtaagtcgctctcatcgctcaa 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14759 caggctaaagaaatgatataattcgttccactccaacagtaagtcgctctcatcgctcaa 14818 Query: 387 gtaaactctgttgtaattttttttgattttctttctattggatgaaaataaaaaccagaa 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14819 gtaaactctgttgtaattttttttgattttctttctattggatgaaaataaaaaccagaa 14878 Query: 447 atacatatttaaggtttgtcaacaatggaaagcgagatgggatctgtgcgttgaggagat 506 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 14879 atacatatttaaggtttgtcaacaatggaaggcgagatgggatctgtgcgttgaggagat 14938 Query: 507 gttctggcgataatagattccacatgccggttgt-atttttgcaatttgtcgaagatctt 565 |||||||||||||||||||||||||| ||||||| ||| | |||||| ||||| |||||| Sbjct: 14939 gttctggcgataatagattccacatg-cggttgtaattctggcaattcgtcgatgatctt 14997 Query: 566 tttagct 572 || |||| Sbjct: 14998 ttcagct 15004 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,664 Number of Sequences: 1807 Number of extensions: 12664 Number of successful extensions: 87 Number of sequences better than 1.0e-20: 1 length of query: 986 length of database: 10,358,551 effective HSP length: 16 effective length of query: 970 effective length of database: 10,329,639 effective search space: 10019749830 effective search space used: 10019749830 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)