BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC40ZB06RM1.SCF screened BAC_end (963 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1423 1421 0.0 >3x_Contig1423 Length = 8454 Score = 1421 bits (717), Expect = 0.0 Identities = 783/800 (97%), Gaps = 4/800 (0%) Strand = Plus / Plus Query: 47 cttcaattgctaaaatgaaagccttgattgaaaattttgactacgagtccatcgtagcga 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 194 cttcaattgctaaaatgaaagccttgattgaaaattttgactacgagtccatcgtagcga 253 Query: 107 tacaaaaagaatgccaagtcattagagagttcactaataagattagaatgagaatgatta 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 254 tacaaaaagaatgccaagtcattagagagttcactaataagattagaatgagaatgatta 313 Query: 167 aacatgattgcattgacatccaaaataatagtgacatttacataaatgaaattattccac 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 314 aacatgattgcattgacatccaaaataatagtgacatttacataaatgaaattattccac 373 Query: 227 cgacatggtttgaattcaaaagggaaggtccaaagtattgcgttcattgcgagtgtgtgg 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 374 cgacatggtttgaattcaaaagggaaggtccaaagtattgcgttcattgcgagtgtgtgg 433 Query: 287 agactattgaatggcgtaacggtccgtggggtaaagcgactttgtgtaatgcatgtggtt 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 agactattgaatggcgtaacggtccgtggggtaaagcgactttgtgtaatgcatgtggtt 493 Query: 347 tgtggtatcgcaaattgaagaaaaaatttaccgcagaacaatcagcaataataatggagg 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 494 tgtggtatcgcaaattgaagaaaaaatttaccgcagaacaatcagcaataataatggagg 553 Query: 407 agaaaagactcttttccaataaacatgataggaaagagttttctaaatttgatgcagatg 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 554 agaaaagactcttttccaataaacatgataggaaagagttttctaaatttgatgcagatg 613 Query: 467 ataaaagactaaagatcattaaggactcattgattgaccggataaacaaattcataaagg 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 614 ataaaagactaaagatcattaaggactcattgattgaccggataaacaaattcataaagg 673 Query: 527 aggtagagttatgcaagagtactgctgccaagctaaagcatataaaagcataagatgata 586 |||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||| Sbjct: 674 aggtagagttatgcaagagtactgctgccaagctaaagcaaataaaagcaaaagaggata 733 Query: 587 tggatcagaaagtgacacctcgggatatatacaagtacgattcaatttctcgtatatgtt 646 ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 734 tggatcagaaagtgacacctcgggaaataaacaagtacgattcaatttctcgtatatgtt 793 Query: 647 gaatgagcagtttagctgacttc-aaatagattgattggaaa-gtttatatcatttcaca 704 ||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||| Sbjct: 794 gaatgagcagtttagctgacttcaaaatagattgattggaaaggtttatatcattcaaca 853 Query: 705 agatatagagctcaaatttttcagttgcccagttttcaccagataacatacaagnagtcg 764 ||||||||||||||||||||||||||||||||| | |||||||||||| || || ||||| Sbjct: 854 agatatagagctcaaatttttcagttgcccagtatacaccagataacaaaccaggagtcg 913 Query: 765 catcatttttccactt-agcattgcaacagatgacttatttaagtttgtgacctttatca 823 |||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 914 catcatttttccacttaagcattgcaacagatgacttatttaagtttgt-acccttatca 972 Query: 824 tcttcacaaaggtttttcaa 843 |||||||||||||||||||| Sbjct: 973 tcttcacaaaggtttttcaa 992 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8360 Number of Sequences: 1807 Number of extensions: 8360 Number of successful extensions: 64 Number of sequences better than 1.0e-20: 1 length of query: 963 length of database: 10,358,551 effective HSP length: 16 effective length of query: 947 effective length of database: 10,329,639 effective search space: 9782168133 effective search space used: 9782168133 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)