BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC40ZB10FM1.SCF screened BAC_end (965 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig864 908 0.0 >3x_Contig864 Length = 2808 Score = 908 bits (458), Expect = 0.0 Identities = 489/498 (98%), Gaps = 1/498 (0%) Strand = Plus / Minus Query: 91 tgagtcataccaccttgcaagatctacggctacttactcaacttgaatatcacatggcaa 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 504 tgagtcataccaccttgcaagatctacggctacttactcaacttgaatatcacatggcaa 445 Query: 151 tggagtctgtctttcataataaaaatacacgttcgccttctttgcatgatgaatcgttgg 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 tggagtctgtctttcataataaaaatacacgttcgccttctttgcatgatgaatcgttgg 385 Query: 211 aggcaacaatgactcttttaccaacagagaagtttggcatcccatggactaataatatgg 270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 aggcaacaatgactcttttaccaacagagaagtttggcatcccatggactaataatatgg 325 Query: 271 atcttgataaatggatgatctcttggactatcgcgttacaaaacataaaagttcagaatg 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 324 atcttgataaatggatgatctcttggactatcgcgttacaaaacataaaagttcagaatg 265 Query: 331 acccgtggtgcttcaaatcaacattattatattacaattttgctcgaatgcatatcaaca 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 264 acccgtggtgcttcaaatcaacattattatattacaattttgctcgaatgcatatcaaca 205 Query: 391 caaaggccctattgcagggcaagaaatccaccctgctggatagtttagaaaatgttgagc 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 204 caaaggccctattgcagggcaagaaatccaccctgctggatagtttagaaaatgttgagc 145 Query: 451 ttattaagctatggcattcgcactctaatagttcccgaattaaagaatcagcagacagta 510 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 144 ttattaagctatggcatccgcactctaatagttccgaaattaaagaatcagcagacagta 85 Query: 511 cggagctgtctgctacgaaaggaatttcacgtttattagccttgggcactacttaagttg 570 ||||||||||||||||||| | ||||||||||| || |||||| ||||||||| |||||| Sbjct: 84 cggagctgtctgctacgaaggaaatttcacgttcatcagcctt-ggcactactcaagttg 26 Query: 571 gcaactaaagataaagac 588 |||||||||||||||||| Sbjct: 25 gcaactaaagataaagac 8 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7573 Number of Sequences: 1807 Number of extensions: 7573 Number of successful extensions: 58 Number of sequences better than 1.0e-20: 1 length of query: 965 length of database: 10,358,551 effective HSP length: 16 effective length of query: 949 effective length of database: 10,329,639 effective search space: 9802827411 effective search space used: 9802827411 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)