BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC40ZB10RM1.SCF screened BAC_end (974 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1288 1055 0.0 >3x_Contig1288 Length = 8015 Score = 1055 bits (532), Expect = 0.0 Identities = 631/656 (96%), Gaps = 6/656 (0%) Strand = Plus / Plus Query: 44 tttttaccaggtctgcttgacatcaacggtaaagaaatcaaaaagtcaatgaccccaact 103 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2426 ttttcaccaggtctgcttgacatcaacggtaaagaaatcaaaaagtcaatgaccccaact 2485 Query: 104 gatttacgtcgcttagaagaagagaatatgaggcaaagattaaatgttgatttggcccca 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2486 gatttacgtcgcttagaagaagagaatatgaggcaaagattaaatgttgatttggcccca 2545 Query: 164 ttctacgagaaagttttgaaatgggactacaaaagaaccagtgagtacccaaccgataca 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2546 ttctacgagaaagttttgaaatgggactacaaaagaaccagtgagtacccaaccgataca 2605 Query: 224 gaaacatcctactctgacgtgaaggactcattttcatcggtctctgattatcaaaaagtc 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2606 gaaacatcctactctgacgtgaaggactcattttcatcggtctctgattatcaaaaagtc 2665 Query: 284 atggaaccgcttttgctgctagaatgttggcagggattgtgctcagctcgagacagggaa 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2666 atggaaccgcttttgctgctagaatgttggcagggattgtgctcagctcgagacagggaa 2725 Query: 344 gaacagaaaagctttagtttcattgtaggaaataggacggttgtttctgacttttacgag 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2726 gaacagaaaagctttagtttcattgtaggaaataggacggttgtttctgacttttacgag 2785 Query: 404 gtatatgcatcaatcaacaaaaatgttgttcgtgacacaggtatcaatgactcggattta 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2786 gtatatgcatcaatcaacaaaaatgttgttcgtgacacaggtatcaatgactcggattta 2845 Query: 464 attgttcttggctatttccccgactcttctttttcaaagccattgacagataaagatttc 523 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| Sbjct: 2846 attgttcttggctatttccccgactcttcttcttcaaagccattgacagataaagaattc 2905 Query: 524 aaacgatcaaatcacacttgtttagccaaaatttaagaaattaaggactcgaaaggtgaa 583 ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||||| | Sbjct: 2906 aaacgatcaaatcacacttgtttagccaaaattaaagagataaagaactcgaaaggtg-a 2964 Query: 584 aaattgggcccttactttcaggattctttgcagtcattaaattctcaaatttttaacctt 643 |||| || |||||| |||||||||| | ||||||| ||||||||||||| ||| | ||| Sbjct: 2965 aaatatggaccttacattcaggattcatcgcagtca-taaattctcaaatcttttaactt 3023 Query: 644 tacgtttctg-aatttatgcctttgaaagtcatgccaatgaccccaagtcgaaaga 698 |||| ||||| |||| ||| ||||||||||||||| ||||||| | |||||||||| Sbjct: 3024 tacg-ttctgaaattcatg-ctttgaaagtcatgcaaatgaccac-agtcgaaaga 3076 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 10,709 Number of Sequences: 1807 Number of extensions: 10709 Number of successful extensions: 68 Number of sequences better than 1.0e-20: 1 length of query: 974 length of database: 10,358,551 effective HSP length: 16 effective length of query: 958 effective length of database: 10,329,639 effective search space: 9895794162 effective search space used: 9895794162 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)