BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC40ZC01FM1.SCF screened BAC_end (947 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1013 1279 0.0 >3x_Contig1013 Length = 5070 Score = 1279 bits (645), Expect = 0.0 Identities = 711/729 (97%), Gaps = 3/729 (0%) Strand = Plus / Plus Query: 86 gggtatgagacacctcctaccctgagtcctgatgaattcgccggaatttcgccaacgaag 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1386 gggtatgagacacctcctaccctgagtcctgatgaattcgccggaatttcgccaacgaag 1445 Query: 146 caagctttcaagaagatgagattcttcttctcaaggcattggcatgggatggatcaagga 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1446 caagctttcaagaagatgagattcttcttctcaaggcattggcatgggatggatcaagga 1505 Query: 206 gaaccagatcattgctattcaactaacaatgatgatcagtcagtgggcaactactcgtgt 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1506 gaaccagatcattgctattcaactaacaatgatgatcagtcagtgggcaactactcgtgt 1565 Query: 266 tacaacaagtataagactgacggtcaacaattagaacgtttattcaacgaagctgttgtc 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1566 tacaacaagtataagactgacggtcaacaattagaacgtttattcaacgaagctgttgtc 1625 Query: 326 gataaaagaccgcctgtaacaagggacgatgctgtgaggaaaatggcaccatttgaggct 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1626 gataaaagaccgcctgtaacaagggacgatgctgtgaggaaaatggcaccatttgaggct 1685 Query: 386 atggaccccagatttgccaacaattggatgaaaaatattcaggactttaacattacattc 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1686 atggaccccagatttgccaacaattggatgaaaaatattcaggactttaacattacattc 1745 Query: 446 agtcctgttgatacagaacctagcattgtgatcccttcatcttctgatgttctaaaaacg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1746 agtcctgttgatacagaacctagcattgtgatcccttcatcttctgatgttctaaaaacg 1805 Query: 506 aagatagcgacagcgacagaaaagggtcagcgcgaaggtcagttatctccggacaaccat 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1806 aagatagcgacagcgacagaaaagggtcagcgcgaaggtcagttatctccggacaaccat 1865 Query: 566 tccaaatctagtggagtatacagagcattggcaaatcaagctatttcttattgcaactcg 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1866 tccaaatctagtggagtatacagagcattggcaaatcaagctatttcttattgcaactcg 1925 Query: 626 ggttcagcgacacagaaatccagtaggtacgaatatggaaatccttctgctttgccagat 685 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 1926 ggttcagcgacacagaaatccagtagttacgaatatggtaatccttctgctttgccagat 1985 Query: 686 cttttattcggtttatagagcctaccaacggtctcaggtaaagaatgttc-acaccctcg 744 || |||| ||||||| |||| ||||||||||||||||||||||| ||||| ||||| || Sbjct: 1986 ctcttatacggtttagagagtctaccaacggtctcaggtaaagattgttcaacacctccg 2045 Query: 745 cagggcccttcggtgcaattgattcaggaatgaagaccattttggatttattgacatcgg 804 ||| |||||||||||||||||||||||| || |||| |||||||| ||||||||||| | Sbjct: 2046 cagtgcccttcggtgcaattgattcagg-atagagacgattttgga-ttattgacatctg 2103 Query: 805 gagggagaa 813 |||| |||| Sbjct: 2104 gaggaagaa 2112 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5875 Number of Sequences: 1807 Number of extensions: 5875 Number of successful extensions: 26 Number of sequences better than 1.0e-20: 1 length of query: 947 length of database: 10,358,551 effective HSP length: 16 effective length of query: 931 effective length of database: 10,329,639 effective search space: 9616893909 effective search space used: 9616893909 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)