BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC40ZC09FM1.SCF screened BAC_end (958 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1649 1304 0.0 >3x_Contig1649 Length = 14442 Score = 1304 bits (658), Expect = 0.0 Identities = 777/809 (96%), Gaps = 6/809 (0%) Strand = Plus / Minus Query: 85 catgcaagtgcttgagatggaattaaaagaacgtaacatgtcacgcagatcttagtgagc 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2032 catgcaagtgcttgagatggaattaaaagaacgtaacatgtcacgcagatcttagtgagc 1973 Query: 145 ttgtgacatggaactgccgttgctagataaattgaaagttagggatttggttgataagag 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1972 ttgtgacatggaactgccgttgctagataaattgaaagttagggatttggttgataagag 1913 Query: 205 attttcgcatcttttctaaacggtctcacttctgtctggagataatgaggaagataacga 264 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1912 attttcgcatcttttcgaaacggtctcacttctgtctggagataatgaggaagataacga 1853 Query: 265 agaccaactacgacttaaaaacagcataaagaatctaagggaacatcttacggaaaagga 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1852 agaccaactacgacttaaaaacagcataaagaatctaagggaacatcttacggaaaagga 1793 Query: 325 agaggaaataaggcaactacatgatgttattagtgtaaaaaatcgagatgctgagcgttt 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1792 agaggaaataaggcaactacatgatgttattagtgtaaaaaatcgagatgctgagcgttt 1733 Query: 385 gaatgacgaattgatcagcatcaacatagaaaacaatcttttacaggaaaggttgacaca 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1732 gaatgacgaattgatcagcatcaacatagaaaacaatcttttacaggaaaggttgacaca 1673 Query: 445 cattcaagcagaatatgacaccttgattgaacgatggttactaaaagcacaaagagaggc 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1672 cattcaagcagaatatgacaccttgattgaacgatggttactaaaagcacaaagagaggc 1613 Query: 505 cgatatcatgaatacgagacttaaatagatatgacatactctatatgcctcaagttataa 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1612 cgatatcatgaatacgagacttaaatagatatgacatactctatatgcctcaagttataa 1553 Query: 565 atgagttgcgagttttataagtgatttgaagttaattccctgcgactcaatggtacatca 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1552 atgagttgcgagttttataagtgatttgaagttaattccctgcgactcaatggtacatca 1493 Query: 625 aatncccagtgcatgaaactctttaaaaattcagttttccaagaaatttgcttcagtagc 684 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1492 aatcccaagtgcatgaaactctttaaaaattcagttttccaagaaatttgcttcagtagc 1433 Query: 685 tccagtc-gaagagcgtcagtctcattatctggaggtcgagagtccgaaacttccctgaa 743 | ||||| |||||||||||||||||| ||||| ||||||||||| |||| || ||||| | Sbjct: 1432 t-cagtcggaagagcgtcagtctcataatctgaaggtcgagagttcgaacctcccctgga 1374 Query: 744 gcatttcattttacaaaaatttttttagcttttcggatcttttcgttttctattacggaa 803 |||||||| ||||| |||||||||||||| |||||||||||||||||| |||| || ||| Sbjct: 1373 gcatttcaatttaccaaaatttttttagc-tttcggatcttttcgtttactatcac-gaa 1316 Query: 804 cccgaaagtattaatgttttcatgttgccacctaagtggatgtttaatggtacattttaa 863 || ||||| ||||||||||||||||| || |||| ||||||||||| |||||| | | Sbjct: 1315 gcctgaagtaataatgttttcatgttgcaactaaagtagatgtttaatgctacattat-a 1257 Query: 864 aaggctaattccatgccatggattcaatt 892 |||||||||| |||| || ||||||||| Sbjct: 1256 gaggctaattcgatgcaat-gattcaatt 1229 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6955 Number of Sequences: 1807 Number of extensions: 6955 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 958 length of database: 10,358,551 effective HSP length: 16 effective length of query: 942 effective length of database: 10,329,639 effective search space: 9730519938 effective search space used: 9730519938 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)