BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC40ZD01FM1.SCF screened BAC_end
         (964 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1567                                                        1047   0.0  

>3x_Contig1567 
          Length = 11673

 Score = 1047 bits (528), Expect = 0.0
 Identities = 588/600 (98%), Gaps = 6/600 (1%)
 Strand = Plus / Minus

                                                                        
Query: 92   gcctagatttgggtacagacatttctcaaaatatgaaaatatgagtgataactgatggaa 151
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7717 gcctagatttgggtacagacatttctcaaaatatgaaaatatgagtgataactgatggaa 7658

                                                                        
Query: 152  caacccgcaaactagttcgctgagagttaaagcacacctaagacctatttattggtactt 211
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7657 caacccgcaaactagttcgctgagagttaaagcacacctaagacctatttattggtactt 7598

                                                                        
Query: 212  tcacttactacttctgcagcaggtttctattttatgcaagctcagttttttttcgaatgt 271
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7597 tcacttactacttctgcagcaggtttctattttatgcaagctcagttttttttcgaatgt 7538

                                                                        
Query: 272  tccaatgttcaaattttcattatcaggaaattatcaccatgatgaggataagagcgatga 331
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7537 tccaatgttcaaattttcattatcaggaaattatcaccatgatgaggataagagcgatga 7478

                                                                        
Query: 332  gagatgcgagaagggtcacattgccatactgggtactgaagcaccattgaaggggaaata 391
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7477 gagatgcgagaagggtcacattgccatactgggtactgaagcaccattgaaggggaaata 7418

                                                                        
Query: 392  ttcagttggcacgttcaatcaattaaataatattcaattctttgtataattatcgggtac 451
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7417 ttcagttggcacgttcaatcaattaaataatattcaattctttgtataattatcgggtac 7358

                                                                        
Query: 452  tagcctggatcaataatgatattaaaattatacacgatgtggagttttaaaaactagtaa 511
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7357 tagcctggatcaataatgatattaaaattatacacgatgtggagttttaaaaactagtaa 7298

                                                                        
Query: 512  aaatagttaaaaatatgagcggatggttgagagttgttgcatgaagctat-attataaca 570
            |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 7297 aaatagttaaaaatatgagcggatggttgagagttgttgcatgaagctataataataaca 7238

                                                                        
Query: 571  atgatagtatgctaagcattgaatctatatttattg-atgatgaattaaacaaaaaaaag 629
            ||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||| 
Sbjct: 7237 atgatagtatgctaagcattgaatctata-ttatagaatgatgaattaaacaaaaaaaaa 7179

                                                                        
Query: 630  gtgggaataacttccaggaatttcatttaaagaattcttggaagtttagtttccattctt 689
            |  ||||||||||||||||| |||| ||||||||||||| ||||||||| ||||||||||
Sbjct: 7178 ggtggaataacttccaggaa-ttcagttaaagaattctt-gaagtttag-ttccattctt 7122


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9511
Number of Sequences: 1807
Number of extensions: 9511
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 1
length of query: 964
length of database: 10,358,551
effective HSP length: 16
effective length of query: 948
effective length of database: 10,329,639
effective search space: 9792497772
effective search space used: 9792497772
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)