BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC40ZD09FM1.SCF screened BAC_end (987 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig515 1277 0.0 >3x_Contig515 Length = 1717 Score = 1277 bits (644), Expect = 0.0 Identities = 693/707 (98%), Gaps = 2/707 (0%) Strand = Plus / Minus Query: 87 ccggtgtttaccctttgagagaactctcgttgactctttccaattttgatataatagaca 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1427 ccggtgtttaccctttgagagaactctcgttgactctttccaattttgatataatagaca 1368 Query: 147 aggggaaaactgtccttgatatgttcggtaatcgagcaatctcaaaatcatcttcaactg 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1367 aggggaaaactgtccttgatatgttcggtaatcgagcaatctcaaaatcatcttcaactg 1308 Query: 207 ataacaacgtcgtaaagatagaaggtgaagacatacattcagattcgaaaggtggccctt 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1307 ataacaacgtcgtaaagatagaaggtgaagacatacattcagattcgaaaggtggccctt 1248 Query: 267 atgatgcgtctgtttcagagacactcgagggagaaccaccaagtgcttcttctcctccta 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1247 atgatgcgtctgtttcagagacactcgagggagaaccaccaagtgcttcttctcctccta 1188 Query: 327 caatggctgaaaatttaacttgcaaacagtgcggggaaactctacaggacaaaaaactgt 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1187 caatggctgaaaatttaacttgcaaacagtgcggggaaactctacaggacaaaaaactgt 1128 Query: 387 tccaagagcacgtcgattatcatctatcagttcaattatcagaacagattaacggagtat 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1127 tccaagagcacgtcgattatcatctatcagttcaattatcagaacagattaacggagtat 1068 Query: 447 cagagaactcaacaatgctgacgcacgcagaaagaatccttctcttcggaaagaaagcta 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1067 cagagaactcaacaatgctgacgcacgcagaaagaatccttctcttcggaaagaaagcta 1008 Query: 507 agaagaatgccgcatcagtgcaaaaacccaaaaaaaaagatggaggaatcatgaagttct 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1007 agaagaatgccgcatcagtgcaaaaacccaaaaaaaaagatggaggaatcatgaagttct 948 Query: 567 tcaagatgtgataaatctccacccacatatacttgtatatttatagttaatcgtatcatc 626 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 947 tcaagaagtgataaatctccacccacatatacttgtatatttatagttaatcgtatcatc 888 Query: 627 gtcttaccagtggcatttatatgatgagcgtggntagtaacgaggtttcagtcgcatatc 686 |||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||| Sbjct: 887 gtcttaccagtggcatttatatgaggagcgtggttagtaacgaggttccagtcgcatatc 828 Query: 687 cgggtaatattctgcttttcgcctttttttcttttctgaattccccattcgatttcgaac 746 |||||||||| ||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 827 cgggtaatatcttgcttttcgtctttctttcttttctgaattccacattcgatttcgaac 768 Query: 747 ttaaaattagacattttagagatccaatgttttgtttaataagtgtg 793 |||||| |||||| || |||||||||||| |||||| |||||||||| Sbjct: 767 ttaaaa-tagacaattaagagatccaatg-tttgttaaataagtgtg 723 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,943 Number of Sequences: 1807 Number of extensions: 13943 Number of successful extensions: 93 Number of sequences better than 1.0e-20: 1 length of query: 987 length of database: 10,358,551 effective HSP length: 16 effective length of query: 971 effective length of database: 10,329,639 effective search space: 10030079469 effective search space used: 10030079469 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)