BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC40ZD10FM1.SCF screened BAC_end
         (961 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1674                                                        1160   0.0  

>3x_Contig1674 
          Length = 12281

 Score = 1160 bits (585), Expect = 0.0
 Identities = 597/600 (99%), Gaps = 1/600 (0%)
 Strand = Plus / Minus

                                                                         
Query: 86    ccgaatacctctgggtacaagatcaatttactaattacttctcacattacaccgaagact 145
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10099 ccgaatacctctgggtacaagatcaatttactaattacttctcacattacaccgaagact 10040

                                                                         
Query: 146   ctcaaatttctaacgcaggaaaaagtctacataactatttcttccccaatggtaacgata 205
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10039 ctcaaatttctaacgcaggaaaaagtctacataactatttcttccccaatggtaacgata 9980

                                                                         
Query: 206   gaatctcagtgaaaaccatggactgtatcgcaacttttatcaataatgagacgttcctca 265
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9979  gaatctcagtgaaaaccatggactgtatcgcaacttttatcaataatgagacgttcctca 9920

                                                                         
Query: 266   tggaatcatccgcttcgaattctgtgccagtatttacaaagtgcatagacatccactact 325
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9919  tggaatcatccgcttcgaattctgtgccagtatttacaaagtgcatagacatccactact 9860

                                                                         
Query: 326   cctaaacactcgataaagattttaagatattatgacctctccggcttgggtgcccattta 385
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9859  cctaaacactcgataaagattttaagatattatgacctctccggcttgggtgcccattta 9800

                                                                         
Query: 386   attgcctgctgagtgagcaataacaaaatcacgtgacttcaaatgcaaaaaaagaaaaga 445
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9799  attgcctgctgagtgagcaataacaaaatcacgtgacttcaaatgcaaaaaaagaaaaga 9740

                                                                         
Query: 446   ataattcggaaccatcgactgaactggtctgacatcttgattctatgtaacagtatgagt 505
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9739  ataattcggaaccatcgactgaactggtctgacatcttgattctatgtaacagtatgagt 9680

                                                                         
Query: 506   atttaaacgacagttccaaaatacgttccagtactcgatttcgacagcaaggtatttgtc 565
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9679  atttaaacgacagttccaaaatacgttccagtactcgatttcgacagcaaggtatttgtc 9620

                                                                         
Query: 566   tattcggaatagatttaatagaagctcaaatcacgctaacgagggttcgcangttgctgt 625
             |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 9619  tattcggaatagatttaatagaagctcaaatcacgctaacgaggtttcgcaggttgctgt 9560

                                                                         
Query: 626   taagactttactgtttttttcgggtgtttgattctactagtcttttttcgcttactacac 685
             |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 9559  taagactttactgtttttttcgggtgtttgattctactagtc-tttttcgcttactacac 9501


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7153
Number of Sequences: 1807
Number of extensions: 7153
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 961
length of database: 10,358,551
effective HSP length: 16
effective length of query: 945
effective length of database: 10,329,639
effective search space: 9761508855
effective search space used: 9761508855
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)