BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC40ZD10FM1.SCF screened BAC_end (961 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1674 1160 0.0 >3x_Contig1674 Length = 12281 Score = 1160 bits (585), Expect = 0.0 Identities = 597/600 (99%), Gaps = 1/600 (0%) Strand = Plus / Minus Query: 86 ccgaatacctctgggtacaagatcaatttactaattacttctcacattacaccgaagact 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10099 ccgaatacctctgggtacaagatcaatttactaattacttctcacattacaccgaagact 10040 Query: 146 ctcaaatttctaacgcaggaaaaagtctacataactatttcttccccaatggtaacgata 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10039 ctcaaatttctaacgcaggaaaaagtctacataactatttcttccccaatggtaacgata 9980 Query: 206 gaatctcagtgaaaaccatggactgtatcgcaacttttatcaataatgagacgttcctca 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9979 gaatctcagtgaaaaccatggactgtatcgcaacttttatcaataatgagacgttcctca 9920 Query: 266 tggaatcatccgcttcgaattctgtgccagtatttacaaagtgcatagacatccactact 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9919 tggaatcatccgcttcgaattctgtgccagtatttacaaagtgcatagacatccactact 9860 Query: 326 cctaaacactcgataaagattttaagatattatgacctctccggcttgggtgcccattta 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9859 cctaaacactcgataaagattttaagatattatgacctctccggcttgggtgcccattta 9800 Query: 386 attgcctgctgagtgagcaataacaaaatcacgtgacttcaaatgcaaaaaaagaaaaga 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9799 attgcctgctgagtgagcaataacaaaatcacgtgacttcaaatgcaaaaaaagaaaaga 9740 Query: 446 ataattcggaaccatcgactgaactggtctgacatcttgattctatgtaacagtatgagt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9739 ataattcggaaccatcgactgaactggtctgacatcttgattctatgtaacagtatgagt 9680 Query: 506 atttaaacgacagttccaaaatacgttccagtactcgatttcgacagcaaggtatttgtc 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9679 atttaaacgacagttccaaaatacgttccagtactcgatttcgacagcaaggtatttgtc 9620 Query: 566 tattcggaatagatttaatagaagctcaaatcacgctaacgagggttcgcangttgctgt 625 |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 9619 tattcggaatagatttaatagaagctcaaatcacgctaacgaggtttcgcaggttgctgt 9560 Query: 626 taagactttactgtttttttcgggtgtttgattctactagtcttttttcgcttactacac 685 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9559 taagactttactgtttttttcgggtgtttgattctactagtc-tttttcgcttactacac 9501 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7153 Number of Sequences: 1807 Number of extensions: 7153 Number of successful extensions: 53 Number of sequences better than 1.0e-20: 1 length of query: 961 length of database: 10,358,551 effective HSP length: 16 effective length of query: 945 effective length of database: 10,329,639 effective search space: 9761508855 effective search space used: 9761508855 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)