BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC40ZE06FM1.SCF screened BAC_end (929 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1410 1076 0.0 >3x_Contig1410 Length = 7640 Score = 1076 bits (543), Expect = 0.0 Identities = 646/674 (95%), Gaps = 5/674 (0%) Strand = Plus / Plus Query: 87 caaagatcgtcaagcgagaagttacctcgaacgaattatgtactagccggtctatccggg 146 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1975 caaagatcgtcaagcgagaagttacctcgaacgaattaggtactagccggtctatccggg 2034 Query: 147 aaaagcagtcctataagagatagaaattccgggactgtaacagaatgtaaacatgaaggg 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2035 aaaagcagtcctataagagatagaaattccgggactgtaacagaatgtaaacatgaaggg 2094 Query: 207 gtttacgctgtaatagcagtgttcattttcccaccatgttgcatattcgggatgattact 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2095 gtttacgctgtaatagcagtgttcattttcccaccatgttgcatattcgggatgattact 2154 Query: 267 catattatcgagatttctttccatataaagagagataaagatggagcaaccactagtgga 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2155 catattatcgagatttctttccatataaagagagataaagatggagcaaccactagtgga 2214 Query: 327 gaaaagggaaaatacaagatcagcttggaagaagtctacaaacggtatttgggaacagaa 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2215 gaaaagggaaaatacaagatcagcttggaagaagtctacaaacggtatttgggaacagaa 2274 Query: 387 accaaccggcaaggactgtctgactgtctgccctttctgcttgaaacttcctgtctgatt 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2275 accaaccggcaaggactgtctgactgtctgccctttctgcttgaaacttcctgtctgatt 2334 Query: 447 gaataccactgcaatgatcgtgacattaatagtcatcctaatcggcttgttgcattactt 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2335 gaataccactgcaatgatcgtgacattaatagtcatcctaatcggcttgttgcattactt 2394 Query: 507 cgtcatatacccattggtcttcagtccattgagttcacttactgggccgaaacatcctga 566 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 2395 cgtcatatacccattggtcttcagtccattgagttcactacctgggccgaaacatctgaa 2454 Query: 567 gttgagcagtttggttcatatttgacanggctcgtacggaacaacgtatggaatttttac 626 ||||||||| |||||||||||| ||| |||||||||||||||||||| |||| ||||| Sbjct: 2455 gttgagcag-ttggttcatattgaacaaggctcgtacggaacaacgtaatgaatatttac 2513 Query: 627 -aagattgcatgataagtccggggatctagt-cagattggtccgaacgaggaagccttca 684 |||||||||||| |||| |||||||||||| ||||| ||||||||||||| |||||||| Sbjct: 2514 aaagattgcatgagaagtacggggatctagtacagataggtccgaacgaggtagccttca 2573 Query: 685 attcctttaagttccggaaacaaatttacctgggaaaatttccctacaagaatttcgaaa 744 ||||||| |||| | |||||| |||||| |||| ||||||||||||||| | ||||||| Sbjct: 2574 attccttcaagtacgtgaaacagatttacatggg-aaatttccctacaag-agttcgaaa 2631 Query: 745 acaatggtgtgggg 758 |||||||||||||| Sbjct: 2632 acaatggtgtgggg 2645 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6198 Number of Sequences: 1807 Number of extensions: 6198 Number of successful extensions: 33 Number of sequences better than 1.0e-20: 1 length of query: 929 length of database: 10,358,551 effective HSP length: 16 effective length of query: 913 effective length of database: 10,329,639 effective search space: 9430960407 effective search space used: 9430960407 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)