BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC40ZE09FM1.SCF screened BAC_end
         (897 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1693                                                        1227   0.0  

>3x_Contig1693 
          Length = 15531

 Score = 1227 bits (619), Expect = 0.0
 Identities = 748/781 (95%), Gaps = 8/781 (1%)
 Strand = Plus / Plus

                                                                        
Query: 89   acttatcctttaactcaaatgaaccatcaagatttatcgttatccggcgatgaaggccat 148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7766 acttatcctttaactcaaatgaaccatcaagatttatcgttatccggcgatgaaggccat 7825

                                                                        
Query: 149  tcttcgtcccagagggatagtgtttacgatgatgctgggtcgatccatagtgagtcttcg 208
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7826 tcttcgtcccagagggatagtgtttacgatgatgctgggtcgatccatagtgagtcttcg 7885

                                                                        
Query: 209  atgattttctaaaggaacgtcgaggacccgtattcgcaagttttctccaatccaaggctt 268
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7886 atgattttcgaaaggaacgtcgaggacccgtattcgcaagttttctccaatccaaggctt 7945

                                                                        
Query: 269  gcatcgttatctaggtcagcttcgaatgcaaacttggcaccttacgattcgcacgattcg 328
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7946 gcatcgttatctaggtcagcttcgaatgcaaacttggcaccttacgattcgcacgattcg 8005

                                                                        
Query: 329  ttgcacgataacggttcgggactgtctctttcgaaatcctcttcgaggaagcaatcgaac 388
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8006 ttgcacgataacggttcgggactgtctctttcgaaatcctcttcgaggaagcaatcgaac 8065

                                                                        
Query: 389  gctggaagctttattccacatcatacccttgaaaacttggtggcaccggcgttagatgaa 448
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8066 gctggaagctttattccacatcatacccttgaaaacttggtggcaccggcgttagatgaa 8125

                                                                        
Query: 449  ggtgtgactattgtaaatgatgattctactgacttggagtcggtggaaatgatttattcg 508
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8126 ggtgtgactattgtaaatgatgattctactgacttggagtcggtggaaatgatttattcg 8185

                                                                        
Query: 509  agaagaccttccactatcggattggacatggcattgggcangac-aggaccaattcatca 567
            |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 8186 agaagaccttccactatcggattggacatggcattgggcaggacaaggaccaattcatca 8245

                                                                        
Query: 568  tcggatgctgccactttgagtgggatcaactcttctacatc-agactgatgatgaccaat 626
            ||||||||||||||||||||||||| ||||||||||||| | |||||||||| |||||||
Sbjct: 8246 tcggatgctgccactttgagtgggaacaactcttctacaacaagactgatgaggaccaat 8305

                                                                        
Query: 627  agtgcctctcaggggtctggcctggnatacagacctagggtgttacgtttttactcttac 686
            ||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||
Sbjct: 8306 agtgcctctcaggggtctggcctggaaaccagacctagggtgttacgtttttactcttac 8365

                                                                        
Query: 687  gccgatatgatttcggatgagaactcttc-tatccaagaagg-ctttcat-acacaatcg 743
            ||||||||||| ||||||||||||||||| |||||||||||| ||| ||| |||||||||
Sbjct: 8366 gccgatatgatatcggatgagaactcttcatatccaagaaggccttccataacacaatcg 8425

                                                                        
Query: 744  ctttcgtcgaccttgttgagacaacaagttgctggtacgctcac-ggatttgttgcccac 802
            |||||||||||||||||||||||||||| |||||||||||  || ||||||| |  ||||
Sbjct: 8426 ctttcgtcgaccttgttgagacaacaaggtgctggtacgcctacaggatttgatagccac 8485

                                                                        
Query: 803  cgaacagaaaactttcc-tcaaattaactgggtt-acccgatttttttattccattcttg 860
             || ||| ||||| ||| |||||| | ||||||| ||| ||||||| || ||||||||||
Sbjct: 8486 agagcaggaaactctccttcaaatcagctgggttcaccagatttttctaatccattcttg 8545

             
Query: 861  a 861
            |
Sbjct: 8546 a 8546


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4697
Number of Sequences: 1807
Number of extensions: 4697
Number of successful extensions: 26
Number of sequences better than 1.0e-20: 1
length of query: 897
length of database: 10,358,551
effective HSP length: 16
effective length of query: 881
effective length of database: 10,329,639
effective search space: 9100411959
effective search space used: 9100411959
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)