BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC40ZE09FM1.SCF screened BAC_end (897 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1693 1227 0.0 >3x_Contig1693 Length = 15531 Score = 1227 bits (619), Expect = 0.0 Identities = 748/781 (95%), Gaps = 8/781 (1%) Strand = Plus / Plus Query: 89 acttatcctttaactcaaatgaaccatcaagatttatcgttatccggcgatgaaggccat 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7766 acttatcctttaactcaaatgaaccatcaagatttatcgttatccggcgatgaaggccat 7825 Query: 149 tcttcgtcccagagggatagtgtttacgatgatgctgggtcgatccatagtgagtcttcg 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7826 tcttcgtcccagagggatagtgtttacgatgatgctgggtcgatccatagtgagtcttcg 7885 Query: 209 atgattttctaaaggaacgtcgaggacccgtattcgcaagttttctccaatccaaggctt 268 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7886 atgattttcgaaaggaacgtcgaggacccgtattcgcaagttttctccaatccaaggctt 7945 Query: 269 gcatcgttatctaggtcagcttcgaatgcaaacttggcaccttacgattcgcacgattcg 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7946 gcatcgttatctaggtcagcttcgaatgcaaacttggcaccttacgattcgcacgattcg 8005 Query: 329 ttgcacgataacggttcgggactgtctctttcgaaatcctcttcgaggaagcaatcgaac 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8006 ttgcacgataacggttcgggactgtctctttcgaaatcctcttcgaggaagcaatcgaac 8065 Query: 389 gctggaagctttattccacatcatacccttgaaaacttggtggcaccggcgttagatgaa 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8066 gctggaagctttattccacatcatacccttgaaaacttggtggcaccggcgttagatgaa 8125 Query: 449 ggtgtgactattgtaaatgatgattctactgacttggagtcggtggaaatgatttattcg 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8126 ggtgtgactattgtaaatgatgattctactgacttggagtcggtggaaatgatttattcg 8185 Query: 509 agaagaccttccactatcggattggacatggcattgggcangac-aggaccaattcatca 567 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 8186 agaagaccttccactatcggattggacatggcattgggcaggacaaggaccaattcatca 8245 Query: 568 tcggatgctgccactttgagtgggatcaactcttctacatc-agactgatgatgaccaat 626 ||||||||||||||||||||||||| ||||||||||||| | |||||||||| ||||||| Sbjct: 8246 tcggatgctgccactttgagtgggaacaactcttctacaacaagactgatgaggaccaat 8305 Query: 627 agtgcctctcaggggtctggcctggnatacagacctagggtgttacgtttttactcttac 686 ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 8306 agtgcctctcaggggtctggcctggaaaccagacctagggtgttacgtttttactcttac 8365 Query: 687 gccgatatgatttcggatgagaactcttc-tatccaagaagg-ctttcat-acacaatcg 743 ||||||||||| ||||||||||||||||| |||||||||||| ||| ||| ||||||||| Sbjct: 8366 gccgatatgatatcggatgagaactcttcatatccaagaaggccttccataacacaatcg 8425 Query: 744 ctttcgtcgaccttgttgagacaacaagttgctggtacgctcac-ggatttgttgcccac 802 |||||||||||||||||||||||||||| ||||||||||| || ||||||| | |||| Sbjct: 8426 ctttcgtcgaccttgttgagacaacaaggtgctggtacgcctacaggatttgatagccac 8485 Query: 803 cgaacagaaaactttcc-tcaaattaactgggtt-acccgatttttttattccattcttg 860 || ||| ||||| ||| |||||| | ||||||| ||| ||||||| || |||||||||| Sbjct: 8486 agagcaggaaactctccttcaaatcagctgggttcaccagatttttctaatccattcttg 8545 Query: 861 a 861 | Sbjct: 8546 a 8546 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4697 Number of Sequences: 1807 Number of extensions: 4697 Number of successful extensions: 26 Number of sequences better than 1.0e-20: 1 length of query: 897 length of database: 10,358,551 effective HSP length: 16 effective length of query: 881 effective length of database: 10,329,639 effective search space: 9100411959 effective search space used: 9100411959 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)