BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC40ZE10FM1.SCF screened BAC_end (987 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig187 928 0.0 >3x_Contig187 Length = 1332 Score = 928 bits (468), Expect = 0.0 Identities = 493/500 (98%), Gaps = 1/500 (0%) Strand = Plus / Plus Query: 87 ctttatcataaatgacccatcaacacctttatccgccccgactaatagaatattggagcg 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 589 ctttatcataaatgacccatcaacacctttatccgccccgactaatagaatattggagcg 648 Query: 147 agtattcttcgagaggaagtcacttatttcccagggttgttctttcatgattgtcaagat 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 649 agtattcttcgagaggaagtcacttatttcccagggttgttctttcatgattgtcaagat 708 Query: 207 catttgtgataatccatctttcgcatctccgacaagtaaaccctccttaaactcagtaaa 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 709 catttgtgataatccatctttcgcatctccgacaagtaaaccctccttaaactcagtaaa 768 Query: 267 tcgttcggatagttgcggttgcgtcctgagaaggtctatattcgatctgatcattttcca 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 769 tcgttcggatagttgcggttgcgtcctgagaaggtctatattcgatctgatcattttcca 828 Query: 327 ctcttcgactgttcgtgtactttccattgaatacatctggagttccattaaacgtgcggc 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 829 ctcttcgactgttcgtgtactttccattgaatacatctggagttccattaaacgtgcggc 888 Query: 387 aaaagagagcctatcattctctaaaaacattgggccaaaagcacaaaacattaagcggat 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 889 aaaagagagcctatcattctctaaaaacattgggccaaaagcacaaaacattaagcggat 948 Query: 447 tagtacagacaaaattttattcggtttattgggcttgctgttaacaagttcgtctgattt 506 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 949 tagtacagacaaaattttattcggtttattgggcttgctgttaacaagttcgtctgaatt 1008 Query: 507 ttc-agtacgtaccgaaatactgtcaaaaactcattcacttcaacattataaaaccattg 565 ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 1009 ttcaagtacgtaccgaaatactgtcaaaaactcattcacttcaacatcataaaaccaatt 1068 Query: 566 ctttttgatacccacccatt 585 |||||| |||| |||||||| Sbjct: 1069 cttttttatactcacccatt 1088 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8347 Number of Sequences: 1807 Number of extensions: 8347 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 987 length of database: 10,358,551 effective HSP length: 16 effective length of query: 971 effective length of database: 10,329,639 effective search space: 10030079469 effective search space used: 10030079469 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)