BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC40ZE10RM1.SCF screened BAC_end
         (920 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1801                                                        1013   0.0  

>3x_Contig1801 
          Length = 57606

 Score = 1013 bits (511), Expect = 0.0
 Identities = 582/599 (97%), Gaps = 5/599 (0%)
 Strand = Plus / Minus

                                                                         
Query: 44    gcttttgttgacaactttctcatttttccatgttgcaaaagaatttggatggaaacagcc 103
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35768 gcttttgttgacaactttctcatttttccatgttgcaaaagaatttggatggaaacagcc 35709

                                                                         
Query: 104   atttacgaagtcttgagatcatagaaactgagatgcgatgagatgagataggaaaactta 163
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35708 atttacgaagtcttgagatcatagaaactgagatgcgatgagatgagataggaaaactta 35649

                                                                         
Query: 164   tgaaaaatccgtagtaggtagcaccattcacttggtttgatagtatatataagactgcta 223
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35648 tgaaaaatccgtagtaggtagcaccattcacttggtttgatagtatatataagactgcta 35589

                                                                         
Query: 224   gtccgtacctgctgatcggatggttatgtagggtgggaggaagggagataaaaatgcaac 283
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35588 gtccgtacctgctgatcggatggttatgtagggtgggaggaagggagataaaaatgcaac 35529

                                                                         
Query: 284   tatacactttattctttgatctgttcttccggatctgtatattgagatagatcgagatcg 343
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35528 tatacactttattctttgatctgttcttccggatctgtatattgagatagatcgagatcg 35469

                                                                         
Query: 344   tctcttttttgtaggtaatggatcagtagcgatacaattccgctgcttatcgaagtagcc 403
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35468 tctcttttttgtaggtaatggatcagtagcgatacaattccgctgcttatcgaagtagcc 35409

                                                                         
Query: 404   atcaatgcgtagcatccattagtaaacttgggggccattgatgtggagtagaacagtaga 463
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35408 atcaatgcgtagcatccattagtaaacttgggggccattgatgtggagtagaacagtaga 35349

                                                                         
Query: 464   gaccaccaagcgttgaccgcaccagagaacatattcatttgatgctaggacaatgggctc 523
             ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 35348 gaccaccaagcgttgaccgcaccagagaacatattca-ttgatgctaggacaat-ggctc 35291

                                                                         
Query: 524   ttttttg-agatcaccacgggattacacgttgcaccttgcaaag-atagaggttgaccag 581
             ||| ||| |||||||||||| ||   |||||||||| ||||||| | |||| ||||||||
Sbjct: 35290 tttcttgaagatcaccacggcatacaacgttgcaccatgcaaagaagagagtttgaccag 35231

                                                                        
Query: 582   tgtaagaaattcct-ccaagttttgtgcagcgaacattaacttcgggtttaaggggttc 639
             |||||||||||||| |||||| ||| ||||||||||| |||||||||||||| ||||||
Sbjct: 35230 tgtaagaaattcctcccaagtattgagcagcgaacataaacttcgggtttaatgggttc 35172


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7150
Number of Sequences: 1807
Number of extensions: 7150
Number of successful extensions: 238
Number of sequences better than 1.0e-20: 1
length of query: 920
length of database: 10,358,551
effective HSP length: 16
effective length of query: 904
effective length of database: 10,329,639
effective search space: 9337993656
effective search space used: 9337993656
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)