BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC40ZF02FM1.SCF screened BAC_end (925 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1719 1070 0.0 >3x_Contig1719 Length = 15804 Score = 1070 bits (540), Expect = 0.0 Identities = 579/588 (98%), Gaps = 3/588 (0%) Strand = Plus / Plus Query: 86 ccttacaaacattcacacaccattgtcattacttgatccaatttgatgacaagtgacaca 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14920 ccttacaaacattcacacaccattgtcattacttgatccaatttgatgacaagtgacaca 14979 Query: 146 aactttctcccgttatacagcacttcctgttaccttcactactgtagattctagtggtct 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14980 aactttctcccgttatacagcacttcctgttaccttcactactgtagattctagtggtct 15039 Query: 206 ttctttttcaacagtgttttttccccttcctcaatttcgcttcaagaggaaaaaaagccc 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15040 ttctttttcaacagtgttttttccccttcctcaatttcgcttcaagaggaaaaaaagccc 15099 Query: 266 gtcagttgagttggctgtttcaattgcaagtacagaaaacggtttgtactcagctagctt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15100 gtcagttgagttggctgtttcaattgcaagtacagaaaacggtttgtactcagctagctt 15159 Query: 326 tcagtgtgtatattgttggaagtttgtagcttggatctaaagcgtcactgccgggatgat 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15160 tcagtgtgtatattgttggaagtttgtagcttggatctaaagcgtcactgccgggatgat 15219 Query: 386 tgtccagttttctcttattccagttaatttcatttttgtgtttgaacttgatatataaaa 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15220 tgtccagttttctcttattccagttaatttcatttttgtgtttgaacttgatatataaaa 15279 Query: 446 gacggacacaaaccgtcaaattgacagtttcgtggtgtctagttgtcgtagcttttctac 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15280 gacggacacaaaccgtcaaattgacagtttcgtggtgtctagttgtcgtagcttttctac 15339 Query: 506 tactgttaatttggattgataaat-attcagtaggaaatagccccactaaaaaattcaag 564 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 15340 tactgttaatttggattgataaataattcagtaggaaatagccccactaaaaaattcaag 15399 Query: 565 actctcttcgtacttgaagagagaaattacatcatacaagatttcatttt-caagttgat 623 ||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 15400 actctctcggtacttgaggagagaaattacatcatacaagatttcattttccaagttgat 15459 Query: 624 aaa-tttattaggacattgtcattcaactcattacaggatttagagaa 670 ||| |||||||||||| ||||| ||||||||| ||||||||||||||| Sbjct: 15460 aaattttattaggacaatgtcaatcaactcatcacaggatttagagaa 15507 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8563 Number of Sequences: 1807 Number of extensions: 8563 Number of successful extensions: 65 Number of sequences better than 1.0e-20: 1 length of query: 925 length of database: 10,358,551 effective HSP length: 16 effective length of query: 909 effective length of database: 10,329,639 effective search space: 9389641851 effective search space used: 9389641851 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)