BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC40ZF09RM1.SCF screened BAC_end (951 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1778 1088 0.0 >3x_Contig1778 Length = 27694 Score = 1088 bits (549), Expect = 0.0 Identities = 628/649 (96%), Gaps = 4/649 (0%) Strand = Plus / Minus Query: 47 atattgaggattcatcaactggtactaaaagaagtgcttcaagtacctataatttgttac 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5543 atattgaggattcatcaactggtactaaaagaagtgcttcaagtacctataatttgttac 5484 Query: 107 aggataatgttacaaaatcaactcagtttcaatttgataacatcaaaacattgaatcgca 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5483 aggataatgttacaaaatcaactcagtttcaatttgataacatcaaaacattgaatcgca 5424 Query: 167 acaatgacgaaatctggttcttacaattctcgtcagatgggagatttttggtttgtgcaa 226 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 5423 acaatgacgaaatctggttcttacaattctcgtcagatgggagatttttggccagtgcaa 5364 Query: 227 gcccctcaaagaaattcgaaaggaaaatcatcatctatgatgtaaaaaataacttcgaaa 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5363 gcccctcaaagaaattcgaaaggaaaatcatcatctatgatgtaaaaaataacttcgaaa 5304 Query: 287 tatatgctatatgttgtgaaactcgtcagtctgttttatatcttaaattttcccctgaca 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5303 tatatgctatatgttgtgaaactcgtcagtctgttttatatcttaaattttcccctgaca 5244 Query: 347 acacgaaattgatcgcatgttcaatcaactccgctgcaaaaatatatgacctaaaccagc 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5243 acacgaaattgatcgcatgttcaatcaactccgctgcaaaaatatatgacctaaaccagc 5184 Query: 407 tatccccccctacatatgatggctatttatgcgaatatgatcagcttaaacctgtagcat 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5183 tatccccccctacatatgatggctatttatgcgaatatgatcagcttaaacctgtagcat 5124 Query: 467 ccgtatttgttacattccccacgacttcagattcatctgccattttcatctaat-ataca 525 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 5123 ccgtatttgttacattccccacgacttcagattcatctgcca-tttcatctaataataca 5065 Query: 526 ccagcatcagctgaaactatgaagttatggtgtggagattggttccatgatcccgaattt 585 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 5064 ccagcatcagctgaaactatgaggttatggtgtggagattggttccatgatcccgaattg 5005 Query: 586 gaagacttcatcgtattaggttctccggattctgatgtaataa-ttatgacctgaaaacg 644 |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 5004 aaagacttcatcgtattaggttctccggattctgatgtaataatttatgacatgaaaacg 4945 Query: 645 cttacatttttcctttgaatttccatgactttgggaagaaaatttaaag 693 ||| ||||| | ||||||| |||||| |||| |||| |||||||| Sbjct: 4944 gctaccattttcgctagaatttcgatgactatggg-agaagatttaaag 4897 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8805 Number of Sequences: 1807 Number of extensions: 8805 Number of successful extensions: 62 Number of sequences better than 1.0e-20: 1 length of query: 951 length of database: 10,358,551 effective HSP length: 16 effective length of query: 935 effective length of database: 10,329,639 effective search space: 9658212465 effective search space used: 9658212465 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)