BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC40ZF12RM1.SCF screened BAC_end (953 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1652 1302 0.0 >3x_Contig1652 Length = 14842 Score = 1302 bits (657), Expect = 0.0 Identities = 847/896 (94%), Gaps = 12/896 (1%) Strand = Plus / Minus Query: 46 cttcttgagtctttccttcctttcttcagctttcttggatctcttcttttcatccttcgc 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12562 cttcttgagtctttccttcctttcttcagctttcttggatctcttcttttcatccttcgc 12503 Query: 106 attcgaaatggtgagaaccttttgcatgaaggaacgtgcctttttctcttcgccgcctat 165 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12502 attcgaaatggtgagaaccttttgcatgaaggaacgtgcctttttctcttcgccgcctag 12443 Query: 166 aacgacagctctcttagccatgtatgttttcttcttttgcggtttcatttgatatatctg 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 12442 aacgacagctctcttagccatgtatgttttcttcttttgcggtttcatttgatagatctg 12383 Query: 226 ggatttgaaaggtaagtctttggcaacagattttggtacctttaaaccgttgaagttcct 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12382 ggatttgaaaggtaagtctttggcaacagattttggtacctttaaaccgttgaagttcct 12323 Query: 286 ttcaactctttcaaccttcttatatgtactgtcattgttggtcggtaaatcgattccaag 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12322 ttcaactctttcaaccttcttatatgtactgtcattgttggtcggtaaatcgattccaag 12263 Query: 346 agatgctctaatttgaccagttagtctcaaacccttccattcagttttatcttttatcaa 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 12262 agatgctctaatttgaccagttagtctcaaacccttccattcagttttatcttttagcaa 12203 Query: 406 caatgaagtaactgggttgtagaatttcttaacttggattggataccatgacctaagaat 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12202 caatgaagtaactgggttgtagaatttcttaacttggattggataccatgacctaagaat 12143 Query: 466 tataatgtcactcaatagtatcttatcctcaaaagttgccctgaaatggccttctggttt 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12142 tataatgtcactcaatagtatcttatcctcaaaagttgccctgaaatggccttctggttt 12083 Query: 526 tgatagagcacgcttgatttcaccacgaataccggnaacagtctttgatttgg-cacctt 584 ||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||| Sbjct: 12082 tgatagagcacgcttgatttcaccacgaataccggaaacagtctt-gatttgggcacctt 12024 Query: 585 cgaatcgtgcaactttcatagcgctagagatcatatcctttatgaaagcagngttcttga 644 |||| |||||||||| |||||||||||||| ||||||||||||||| |||| |||||||| Sbjct: 12023 cgaaccgtgcaacttccatagcgctagagaacatatcctttatgaaggcagtgttcttga 11964 Query: 645 agattttgt-aggatatccanncagctttattttc-tcacaatttctacgcttgcatcga 702 ||||||||| |||||| ||| ||||||| |||| |||||||||||||||||||||||| Sbjct: 11963 agattttgtaaggataaccaacaagctttaatttcttcacaatttctacgcttgcatcga 11904 Query: 703 tctcctctacaata-cagtcgcagctattctgaaactttcagttgtatcactgttagcaa 761 |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 11903 tctcctctacaataccagtcgcagctattctgaaacttccagttgtatcactgttagcaa 11844 Query: 762 ct-tttggacacaccaaaaagtggt-tttggcgagcacaagggaccat-gaaagaatctg 818 || |||| |||| || |||||||| |||||||||||||||||||||| ||||||| ||| Sbjct: 11843 ctatttgaacaccacagaaagtggtatttggcgagcacaagggaccatagaaagaagctg 11784 Query: 819 tacattaa-cctgttctgggatatacttc-acattctattnccggttctaaagtcccta- 875 |||| ||| | |||||||| |||||||| |||||||| | | ||||||| |||| ||| Sbjct: 11783 tacaataagcatgttctggagtatacttcaacattctagtcctggttctagagtcactag 11724 Query: 876 tggtggtatttgggtagattttggaaacttttccaacccagagttaaacctaaagg 931 |||| |||| | |||||| ||||||||| | ||||||| |||| |||| ||||||| Sbjct: 11723 tggt-gtatattggtagagtttggaaacgtctccaaccaagagataaaactaaagg 11669 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7707 Number of Sequences: 1807 Number of extensions: 7707 Number of successful extensions: 55 Number of sequences better than 1.0e-20: 1 length of query: 953 length of database: 10,358,551 effective HSP length: 16 effective length of query: 937 effective length of database: 10,329,639 effective search space: 9678871743 effective search space used: 9678871743 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)