BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC40ZG02FM1.SCF screened BAC_end (930 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1060 1116 0.0 >3x_Contig1060 Length = 4482 Score = 1116 bits (563), Expect = 0.0 Identities = 585/591 (98%), Gaps = 1/591 (0%) Strand = Plus / Minus Query: 86 tgccaagatgtagcgaaaactatcatgaataaaggtgaaagaccagatgtaatcattgct 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 591 tgccaagatgtagcgaaaactatcatgaataaaggtgaaagaccagatgtaatcattgct 532 Query: 146 attactggtggtggtatgattccagccaggataatcagatcttttttgaaatccaagggt 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 531 attactggtggtggtatgattccagccaggataatcagatcttttttgaaatccaagggt 472 Query: 206 caaaagaacattccaatccaagcaatcggtttgtcattatatgaagatttaggtctggat 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 471 caaaagaacattccaatccaagcaatcggtttgtcattatatgaagatttaggtctggat 412 Query: 266 gaacaagttgagacaattggaaaagaagttatcagaactcaatggttagattttggtgct 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 gaacaagttgagacaattggaaaagaagttatcagaactcaatggttagattttggtgct 352 Query: 326 ttggacaaacattttgattctttgatcggtaagagaattttgattgtcgatgaagttgat 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 ttggacaaacattttgattctttgatcggtaagagaattttgattgtcgatgaagttgat 292 Query: 386 gacacgagaactaccctacattatgccttgactgaattggaaaaagaggttcatgagcaa 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 291 gacacgagaactaccctacattatgccttgactgaattggaaaaagaggttcatgagcaa 232 Query: 446 caggtgaaattgaacagattgagtgaggagactactttctctatctttgttttacacaac 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 caggtgaaattgaacagattgagtgaggagactactttctctatctttgttttacacaac 172 Query: 506 aaggacaagcctaaaaaggttgaactaccaaaagaactgttcgacaatgaaagatatatt 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 171 aaggacaagcctaaaaaggttgaactaccaaaagaactgttcgacaatgaaagatatatt 112 Query: 566 gcagctgttactgtgcctgacaaatggttatgctatccatgggaaagcattgatattgaa 625 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 111 gcagctgttactgtgcctgacaaatggttatgctatccatgggaagcaattgatattgaa 52 Query: 626 gaacataccaagtttgctatccaacaa-gtaataactgattggagccgcat 675 ||||||||||||||||||||||||||| ||||||||||| |||||| |||| Sbjct: 51 gaacataccaagtttgctatccaacaaggtaataactgaatggagcggcat 1 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8628 Number of Sequences: 1807 Number of extensions: 8628 Number of successful extensions: 66 Number of sequences better than 1.0e-20: 1 length of query: 930 length of database: 10,358,551 effective HSP length: 16 effective length of query: 914 effective length of database: 10,329,639 effective search space: 9441290046 effective search space used: 9441290046 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)