BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC40ZG02RM1.SCF screened BAC_end
         (897 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1777                                                        1417   0.0  

>3x_Contig1777 
          Length = 26319

 Score = 1417 bits (715), Expect = 0.0
 Identities = 810/833 (97%), Gaps = 9/833 (1%)
 Strand = Plus / Minus

                                                                        
Query: 36   gcttaacatttgttcc-catcttctttattatctggtttacccaatcctctcaacatctt 94
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2580 gcttaacatttgttccacatcttctttattatctggtttacccaatcctctcaacatctt 2521

                                                                        
Query: 95   tgcaagatttgattctgatatcattccatctccatcgtcatctattagttggaatgcttc 154
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2520 tgcaagatttgattctgatatcattccatctccatcgtcatctattagttggaatgcttc 2461

                                                                        
Query: 155  ctgcattttcttgatctgctcttgtgtaaactgggaaaaagtgaccgaactactcttatt 214
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2460 ctgcattttcttgatctgctcttgtgtaaactgggaaaaagtgaccgaactactcttatt 2401

                                                                        
Query: 215  catcgcgaagctagtaaacttgttctcactattccaatgtatataaagatccaacactga 274
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2400 catcgcgaagctagtaaacttgttctcactattccaatgtatataaagatccaacactga 2341

                                                                        
Query: 275  cctttatttgctaaagtacccgttgtctctgtaacgagatgctattctgtgttttttggt 334
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2340 cctttatttgctaaagtacccgttgtctctgtaacgagatgctattctgtgttttttggt 2281

                                                                        
Query: 335  tcagatgcatatgtctaaaacgtaaatagtgaataatctttctaacttttctagatttcg 394
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2280 tcagatgcatatgtctaaaacgtaaatagtgaataatctttctaacttttctagatttcg 2221

                                                                        
Query: 395  aacaaaaaactaagcagagccaatctacagaattcaattgactacatgatattagtaaaa 454
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2220 aacaaaaaactaagcagagccaatctacagaattcaattgactacatgatattagtaaaa 2161

                                                                        
Query: 455  gtcaagagaaaagatacctaagctactgcataccatcgtgaaactgacccatttataaca 514
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2160 gtcaagagaaaagatacctaagctactgcataccatcgtgaaactgacccatttataaca 2101

                                                                        
Query: 515  tcaatatcctgatatagacttcttggcgattaattgagtacaaagttnttgattaacgac 574
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2100 tcaatatcctgatatagacttcttggcgattaattgagtacaaagtttttgattaacgac 2041

                                                                        
Query: 575  agatttgggatagttttccagtaaatcagataacgatgtcagcagtgaagaaactgttga 634
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2040 agatttgggatagttttccagtaaatcagaaaacgatgtcagcagtgaagaaactgttga 1981

                                                                        
Query: 635  agaatgcanagactgcattagcagatttcgattgng-atatgccattgagctttccgagg 693
            |||||||| ||||||||||||||||||  ||||| | |||||||||||||||||||||||
Sbjct: 1980 agaatgcaaagactgcattagcagattcggattgggaatatgccattgagctttccgagg 1921

                                                                        
Query: 694  aagtattagaagaagattatgagaactactttgcatacgtttttctatggaaagncaatg 753
            ||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||  ||||
Sbjct: 1920 aagtattagaagaggataatgagaactactttgcatacgtttttctagggaaagcaaatg 1861

                                                                        
Query: 754  aaagcattggtcanaacgtaaaggc-aaagacaactaccttaaagcca-tgccttggac- 810
            ||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||| 
Sbjct: 1860 aaagcattggtcagaacgtaaaggcaaaagacaactaccttaaagccattgccttggacg 1801

                                                                 
Query: 811  atacaaa-gtgattgctgggaaa-gtttatttgtgc--ttttaaaatgcacaa 859
            ||||||| ||||||||| ||||| ||||||||||||  ||| |||||||||||
Sbjct: 1800 atacaaatgtgattgcttggaaaggtttatttgtgctatttaaaaatgcacaa 1748


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6953
Number of Sequences: 1807
Number of extensions: 6953
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 897
length of database: 10,358,551
effective HSP length: 16
effective length of query: 881
effective length of database: 10,329,639
effective search space: 9100411959
effective search space used: 9100411959
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)