BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC40ZG02RM1.SCF screened BAC_end (897 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1777 1417 0.0 >3x_Contig1777 Length = 26319 Score = 1417 bits (715), Expect = 0.0 Identities = 810/833 (97%), Gaps = 9/833 (1%) Strand = Plus / Minus Query: 36 gcttaacatttgttcc-catcttctttattatctggtttacccaatcctctcaacatctt 94 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2580 gcttaacatttgttccacatcttctttattatctggtttacccaatcctctcaacatctt 2521 Query: 95 tgcaagatttgattctgatatcattccatctccatcgtcatctattagttggaatgcttc 154 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2520 tgcaagatttgattctgatatcattccatctccatcgtcatctattagttggaatgcttc 2461 Query: 155 ctgcattttcttgatctgctcttgtgtaaactgggaaaaagtgaccgaactactcttatt 214 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2460 ctgcattttcttgatctgctcttgtgtaaactgggaaaaagtgaccgaactactcttatt 2401 Query: 215 catcgcgaagctagtaaacttgttctcactattccaatgtatataaagatccaacactga 274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2400 catcgcgaagctagtaaacttgttctcactattccaatgtatataaagatccaacactga 2341 Query: 275 cctttatttgctaaagtacccgttgtctctgtaacgagatgctattctgtgttttttggt 334 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2340 cctttatttgctaaagtacccgttgtctctgtaacgagatgctattctgtgttttttggt 2281 Query: 335 tcagatgcatatgtctaaaacgtaaatagtgaataatctttctaacttttctagatttcg 394 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2280 tcagatgcatatgtctaaaacgtaaatagtgaataatctttctaacttttctagatttcg 2221 Query: 395 aacaaaaaactaagcagagccaatctacagaattcaattgactacatgatattagtaaaa 454 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2220 aacaaaaaactaagcagagccaatctacagaattcaattgactacatgatattagtaaaa 2161 Query: 455 gtcaagagaaaagatacctaagctactgcataccatcgtgaaactgacccatttataaca 514 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2160 gtcaagagaaaagatacctaagctactgcataccatcgtgaaactgacccatttataaca 2101 Query: 515 tcaatatcctgatatagacttcttggcgattaattgagtacaaagttnttgattaacgac 574 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2100 tcaatatcctgatatagacttcttggcgattaattgagtacaaagtttttgattaacgac 2041 Query: 575 agatttgggatagttttccagtaaatcagataacgatgtcagcagtgaagaaactgttga 634 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2040 agatttgggatagttttccagtaaatcagaaaacgatgtcagcagtgaagaaactgttga 1981 Query: 635 agaatgcanagactgcattagcagatttcgattgng-atatgccattgagctttccgagg 693 |||||||| |||||||||||||||||| ||||| | ||||||||||||||||||||||| Sbjct: 1980 agaatgcaaagactgcattagcagattcggattgggaatatgccattgagctttccgagg 1921 Query: 694 aagtattagaagaagattatgagaactactttgcatacgtttttctatggaaagncaatg 753 ||||||||||||| ||| ||||||||||||||||||||||||||||| |||||| |||| Sbjct: 1920 aagtattagaagaggataatgagaactactttgcatacgtttttctagggaaagcaaatg 1861 Query: 754 aaagcattggtcanaacgtaaaggc-aaagacaactaccttaaagcca-tgccttggac- 810 ||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 1860 aaagcattggtcagaacgtaaaggcaaaagacaactaccttaaagccattgccttggacg 1801 Query: 811 atacaaa-gtgattgctgggaaa-gtttatttgtgc--ttttaaaatgcacaa 859 ||||||| ||||||||| ||||| |||||||||||| ||| ||||||||||| Sbjct: 1800 atacaaatgtgattgcttggaaaggtttatttgtgctatttaaaaatgcacaa 1748 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6953 Number of Sequences: 1807 Number of extensions: 6953 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 897 length of database: 10,358,551 effective HSP length: 16 effective length of query: 881 effective length of database: 10,329,639 effective search space: 9100411959 effective search space used: 9100411959 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)