BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC40ZG04FM1.SCF screened BAC_end (971 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1692 1150 0.0 >3x_Contig1692 Length = 16448 Score = 1150 bits (580), Expect = 0.0 Identities = 667/690 (96%), Gaps = 6/690 (0%) Strand = Plus / Plus Query: 87 ttgatctctttggctgccggtgttacattgaaccaattgtctcaatactacaaaaaggtt 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2202 ttgatctctttggctgccggtgttacattgaaccaattgtctcaatactacaaaaaggtt 2261 Query: 147 tctcgtgttatgaccaacactccagctaaatacggttatggtactgcaattgtgtcacat 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2262 tctcgtgttatgaccaacactccagctaaatacggttatggtactgcaattgtgtcacat 2321 Query: 207 tctactagcgtcgagcctcatgataaagccattgtatcggaattggttagccaagtcggt 266 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2322 tctactagcgtcgagcctcaggataaagccattgtatcggaattggttagccaagtcggt 2381 Query: 267 aaatgtttggaactaccagaaaaaaatatggacgcagctactgcgctagtcggctcgggt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2382 aaatgtttggaactaccagaaaaaaatatggacgcagctactgcgctagtcggctcgggt 2441 Query: 327 ccagcttttgtactactaatgctagaatcaatgatggaagccggactaaagatgggcatc 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2442 ccagcttttgtactactaatgctagaatcaatgatggaagccggactaaagatgggcatc 2501 Query: 387 ccattgaaggagtcccgcgagtgtgctatgaaagtgttggaaggtactgccaagatggtc 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2502 ccattgaaggagtcccgcgagtgtgctatgaaagtgttggaaggtactgccaagatggtc 2561 Query: 447 gagatttcaggacaaagtcctggtgtgttgaagcaccaagtgtgtactccaggaggtact 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2562 gagatttcaggacaaagtcctggtgtgttgaagcaccaagtgtgtactccaggaggtact 2621 Query: 507 acgatcgctggtctatgtgtcatggaagacaaaggcgtcaagtccggcattatccgtggt 566 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2622 acgatcgctggtctatgtgtcatggaagacaagggcgtcaagtccggcattatccgtggt 2681 Query: 567 atcgaagaagcagcaagagtttccaaggaattgggccataagttgtgagcacatactatc 626 |||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||| Sbjct: 2682 atcgaagaagcagcaagagtttccaaggaattgggccaaaagaagtgagcacaaactatc 2741 Query: 627 tctgtacgctttataacagngggccctaataataattataattaatagtgggcataacat 686 ||||||||||||||||||| | | |||||||||| |||| ||||||| | |||||||| Sbjct: 2742 tctgtacgctttataacagt-agtcataataataataataa-taatagtagtcataacat 2799 Query: 687 tctcactcacatgaataatgtcacgtgaacaaaaaacaactgcattttaccttgtccacc 746 ||||||||||||| | |||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 2800 tctcactcacatg-agaatgtcacgtgaacaaaaaacaactgca--ttaccctgtccacc 2856 Query: 747 ccttaaaaccctttcaccaaactgtccttt 776 |||| |||||| ||||||| |||||||||| Sbjct: 2857 cctt-aaacccgttcaccacactgtccttt 2885 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,289 Number of Sequences: 1807 Number of extensions: 13289 Number of successful extensions: 211 Number of sequences better than 1.0e-20: 1 length of query: 971 length of database: 10,358,551 effective HSP length: 16 effective length of query: 955 effective length of database: 10,329,639 effective search space: 9864805245 effective search space used: 9864805245 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)