BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC40ZG10RM1.SCF screened BAC_end (960 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1187 1078 0.0 >3x_Contig1187 Length = 6482 Score = 1078 bits (544), Expect = 0.0 Identities = 599/616 (97%), Gaps = 1/616 (0%) Strand = Plus / Minus Query: 44 gctttcaaataatagatagtggagttttttaactccgtccacgttttcatgtcagaactt 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1806 gctttcaaataatagatagtggagttttttaactccgtccacgttttcatgtcagaactt 1747 Query: 104 aatgaataaaacattctactattcgattgcggtaatggtttaggagcaagtggctgtgag 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1746 aatgaataaaacattctactattcgattgcggtaatggtttaggagcaagtggctgtgag 1687 Query: 164 tttttcggacctgcttcttcatttttttcattggattgcgtaggatttgaatgcatactg 223 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1686 tttttcggacctgcttcttcatttttttcagtggattgcgtaggatttgaatgcatactg 1627 Query: 224 ggtgatcgacctggagatggacagggttgacttatgtctggttttggaccagatggtgta 283 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1626 ggtgatcgacctggagatggacagggttgacttaggtctggttttggaccagatggtgta 1567 Query: 284 tttggttgcttttgagaagagtttccactgatgacaaccattggattaatgggactcgca 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1566 tttggttgcttttgagaagagtttccactgatgacaaccattggattaatgggactcgca 1507 Query: 344 tcatgtaagttacggtgctgagaagaaatgacagattccagatccatcacttgagtatta 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1506 tcatgtaagttacggtgctgagaagaaatgacagattccagatccatcacttgagtatta 1447 Query: 404 ggcaaaaagtctgattctaggcttcttgcttgtaagtcgaccaggttttcattatgcggg 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1446 ggcaaaaagtctgattctaggcttcttgcttgtaagtcgaccaggttttcattaggcggg 1387 Query: 464 aaaacagattttaagcttagttcaggtgtccttgatatatgtaaagatgtacaataaatg 523 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1386 aaaacagattttaagcttagttcaggtgtccttgatataggtaaagatgtacaataaatg 1327 Query: 524 ttcatttctttattgaagtataataaattattgcttgtagtcaaaa-cggggttcatacc 582 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 1326 ttcatttctttattgaagtataataaattattgcttgtagtcaaaaccggggtccatacc 1267 Query: 583 ggcacaacctcttgtcttgacatgttatttaagaacatttcaacttctttagtagaaaga 642 ||||| |||||||||||| | |||| ||| | | ||||||||||||||||||||||| Sbjct: 1266 ggcaccccctcttgtcttgccctgttctttccgcgcctttcaacttctttagtagaaaga 1207 Query: 643 attttgatttctgact 658 || ||||||||||||| Sbjct: 1206 atgttgatttctgact 1191 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8472 Number of Sequences: 1807 Number of extensions: 8472 Number of successful extensions: 60 Number of sequences better than 1.0e-20: 1 length of query: 960 length of database: 10,358,551 effective HSP length: 16 effective length of query: 944 effective length of database: 10,329,639 effective search space: 9751179216 effective search space used: 9751179216 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)