BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC40ZH01FM1.SCF screened BAC_end (947 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1786 402 e-112 >3x_Contig1786 Length = 33838 Score = 402 bits (203), Expect = e-112 Identities = 213/215 (99%), Gaps = 1/215 (0%) Strand = Plus / Minus Query: 87 taaatttggtccatagaaaatcaaacaaatctaagataatcttttttaatcatcatgtat 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24298 taaatttggtccatagaaaatcaaacaaatctaagataatcttttttaatcatcatgtat 24239 Query: 147 tatcaatatttagtctccattttcataatactaactttgtaggttcttgtcctttttacg 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24238 tatcaatatttagtctccattttcataatactaactttgtaggttcttgtcctttttacg 24179 Query: 207 tgatgttacattttggatgctgtataattcggatttgggtttattccttttttttttttg 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24178 tgatgttacattttggatgctgtataattcggatttgggtttattccttttttttttttg 24119 Query: 267 ttacttcttggagtactttctttttagctcaaaag 301 |||||||||| ||||||||| |||||||||||||| Sbjct: 24118 ttacttcttgtagtactttc-ttttagctcaaaag 24085 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 30,217 Number of Sequences: 1807 Number of extensions: 30217 Number of successful extensions: 413 Number of sequences better than 1.0e-20: 1 length of query: 947 length of database: 10,358,551 effective HSP length: 16 effective length of query: 931 effective length of database: 10,329,639 effective search space: 9616893909 effective search space used: 9616893909 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)