BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC41ZA03FM1.SCF screened BAC_end (917 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1330 1120 0.0 >3x_Contig1330 Length = 7703 Score = 1120 bits (565), Expect = 0.0 Identities = 627/642 (97%), Gaps = 5/642 (0%) Strand = Plus / Plus Query: 87 atatcaaagctcgatacgtctctttggaaagtgctgtttcaatattttagattgcagttg 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4532 atatcaaagctcgatacgtctctttggaaagtgctgtttcaatattttagattgcagttg 4591 Query: 147 attccaggcaatgaaaggaagttggctgattatagagatattctgttcgtgatcaaaaac 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4592 attccaggcaatgaaaggaagttggctgattatagagatattctgttcgtgatcaaaaac 4651 Query: 207 catgaacaattccatttcgttgtgatgtgttcgtttattaattactgtctcgatgaaggg 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4652 catgaacaattccatttcgttgtgatgtgttcgtttattaattactgtctcgatgaaggg 4711 Query: 267 atcagcataccagctgatatgtgggtttattttagtgaaatggacacagctcatgtcaaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4712 atcagcataccagctgatatgtgggtttattttagtgaaatggacacagctcatgtcaaa 4771 Query: 327 cttaaaatatggaaaatactcttggagctcttagttttaatcttcaaggacattaacatt 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4772 cttaaaatatggaaaatactcttggagctcttagttttaatcttcaaggacattaacatt 4831 Query: 387 actgataagctcacagaactgaaatccttctttgacaacaataaagataaaatcgatagt 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4832 actgataagctcacagaactgaaatccttctttgacaacaataaagataaaatcgatagt 4891 Query: 447 ccattggaatcaattcacctttttgacactgtatcattgaagcttgactttcctgtattc 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4892 ccattggaatcaattcacctttttgacactgtatcattgaagcttgactttcctgtattc 4951 Query: 507 ggatacaaagatgtaaaaaatttgctattattctttcaaagtgtcagttatttaccgaat 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4952 ggatacaaagatgtaaaaaatttgctattattctttcaaagtgtcagttatttaccgaat 5011 Query: 567 tgtttcgancaaagatcaaacttctctgntaagtttcttaccgaanactatatcaacaac 626 |||||||| |||||||||||||||||| |||| ||||||||||| |||||||||||||| Sbjct: 5012 tgtttcgacaaaagatcaaacttctctgttaag-ttcttaccgaaaactatatcaacaac 5070 Query: 627 tggaaaagctcctttcctcctaggatgaaaaatggtccactcttcaaatggaatcttttg 686 ||| ||||||||||||||||| ||||||||||| || |||||| ||||| |||| |||| Sbjct: 5071 tgg-aaagctcctttcctccttggatgaaaaat-gttcactctccaaattgaattctttg 5128 Query: 687 cacaaattttatcacactttgtttggacctgggtgaagttct 728 ||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 5129 cacaaattttatcacactttg-ttggacct-ggtgaagttct 5168 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7225 Number of Sequences: 1807 Number of extensions: 7225 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 917 length of database: 10,358,551 effective HSP length: 16 effective length of query: 901 effective length of database: 10,329,639 effective search space: 9307004739 effective search space used: 9307004739 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)