BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC41ZA06RM1.SCF screened BAC_end (899 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1362 1360 0.0 >3x_Contig1362 Length = 8864 Score = 1360 bits (686), Expect = 0.0 Identities = 797/820 (97%), Gaps = 11/820 (1%) Strand = Plus / Plus Query: 52 cttattacgcttctgatacaaacttggtaaagttttggaattggggttggtttggaagga 111 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 cttattacgcttctgatacaaacttggtaaagttttggaattggggttggtttggaagga 633 Query: 112 tcgattaagttatcagcacaagcatcattgtatttctcggcgaaccatttcaaagatgat 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 634 tcgattaagttatcagcacaagcatcattgtatttctcggcgaaccatttcaaagatgat 693 Query: 172 tttaagtcaactctgttactattcaatagagattggaaatattgcttttcgaaatctaca 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 694 tttaagtcaactctgttactattcaatagagattggaaatattgcttttcgaaatctaca 753 Query: 232 gtattgctcaaaagcgctggtcttaagattctaatttggtgatttgcaatgtctaacttc 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 gtattgctcaaaagcgctggtcttaagattctaatttggtgatttgcaatgtctaacttc 813 Query: 292 attgcttccagaatttgaaacaccaatctgagagcttccaccaaagtcgatattgagtta 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 814 attgcttccagaatttgaaacaccaatctgagagcttccaccaaagtcgatattgagtta 873 Query: 352 ttttcctctgcttttttgaactttgaggacattttgtctacccatggatctctcattggt 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 874 ttttcctctgcttttttgaactttgaggacattttgtctacccatggatctctcattggt 933 Query: 412 gcgcaatggtgtttgaataattgtgataaccagtcactgaaatttgacattacaagtgat 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 934 gcgcaatggtgtttgaataattgtgataaccagtcactgaaatttgacattacaagtgat 993 Query: 472 ccctttaagagctcttgaatcaacaattcagtatccaaaacgtttgccacagtagatact 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 994 ccctttaagagctcttgaatcaacaattcagtatccaaaacgtttgccacagtagatact 1053 Query: 532 tctttttgaggaactattgttacaagaacatctttcaaagtattgaatagaggtactagt 591 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1054 tctttttgaggaactattgttacaagaacatctttcaaagtattgaatagaggtactagt 1113 Query: 592 ctagatctgttttcgtcgaaaacatcaggcctttggttgtaaacataaatttcattctc- 650 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1114 ctagatctgttttcgtcgaaaacatcaggcctttggttgtaaacataaatttcattctca 1173 Query: 651 acatcactccagtacttatcggncatttgtctcttcttgatccctctttca-catcccaa 709 |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| || Sbjct: 1174 acatcactccagtacttatcggcaatttgtctcttcttgatccctctttcaccatccaaa 1233 Query: 710 -ttgccctaatttgt-acata-gatcg-acactatgtcgtgtctgatttgaggattcttc 765 ||| ||||| |||| ||||| ||||| |||||||||||||||||| ||||||||||||| Sbjct: 1234 tttggcctaaattgtaacataggatcgaacactatgtcgtgtctgagttgaggattcttc 1293 Query: 766 ac-atctcagaccaatcgatctttttc-agcattgcaaa-taatggggggtaaagg-att 821 || ||||||||| ||||||||| |||| ||||||||||| |||| ||||||||||| ||| Sbjct: 1294 acaatctcagacaaatcgatctctttcaagcattgcaaattaattgggggtaaaggaatt 1353 Query: 822 ggagtngggtattttttggatgtatttgaatctttcttca 861 ||||| |||||| |||| ||||||||||| |||||||||| Sbjct: 1354 ggagttgggtatgtttt-gatgtatttgattctttcttca 1392 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7352 Number of Sequences: 1807 Number of extensions: 7352 Number of successful extensions: 50 Number of sequences better than 1.0e-20: 1 length of query: 899 length of database: 10,358,551 effective HSP length: 16 effective length of query: 883 effective length of database: 10,329,639 effective search space: 9121071237 effective search space used: 9121071237 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)