BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC41ZA09RM1.SCF screened BAC_end (888 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1713 1249 0.0 >3x_Contig1713 Length = 18539 Score = 1249 bits (630), Expect = 0.0 Identities = 772/803 (96%), Gaps = 14/803 (1%) Strand = Plus / Minus Query: 45 gctttagagctttctttgaatactcattacatcgacctaacgaagtatttcaccgaagct 104 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 8278 gctttagagctttctttgaatacgcattacatcgacctaacgaagtatttcaccgaagct 8219 Query: 105 tctcatgtcacggatatgattcatctgggtcatcattacgatggaaggttcttccgtggt 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8218 tctcatgtcacggatatgattcatctgggtcatcattacgatggaaggttcttccgtggt 8159 Query: 165 ggattatctcatagtgaagttagagccagattggatgccattattagagcctggttgcat 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8158 ggattatctcatagtgaagttagagccagattggatgccattattagagcctggttgcat 8099 Query: 225 ttcactgtttccaatgatcttactgcatggttagctcatggtactttgtacggttggctt 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8098 ttcactgtttccaatgatcttactgcatggttagctcatggtactttgtacggttggctt 8039 Query: 285 tacaacggattggcgttcacttgggatggtgatcatgacgttcaaatgcctattgctgat 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8038 tacaacggattggcgttcacttgggatggtgatcatgacgttcaaatgcctattgctgat 7979 Query: 345 ttaaaccgtatggcgaaaaaatttaacccaaaccgttatcgttgaggatcctactagagg 404 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 7978 ttaaaccgtatggcgaaaaaatttaa-ccaaaccgttatcgttgaggatcctactagagg 7920 Query: 405 aaacggtagatatttcctcgacgtgggtaccttcatcactgctaggaacaaggggaacgg 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7919 aaacggtagatatttcctcgacgtgggtaccttcatcactgctaggaacaaggggaacgg 7860 Query: 465 tttgaataacattgacgccagattcattgacgttgattctggtttgtacgttgatatcac 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7859 tttgaataacattgacgccagattcattgacgttgattctggtttgtacgttgatatcac 7800 Query: 525 cggtctttctgtatcttatgaaccaattgccgatagattcgaatggttagtccacaaata 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7799 cggtctttctgtatcttatgaaccaattgccgatagattcgaatggttagtccacaaata 7740 Query: 585 ttttaatgatttgaaaactgacccagaacatatgccattctacgaggaccctaacgttgt 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7739 ttttaatgatttgaaaactgacccagaacatatgccattctacgaggaccctaacgttgt 7680 Query: 645 tcctaacgtctcatggctcanncgtctggatagatttgagtatgatttggcatt-aataa 703 ||||||||||||| |||||| |||||||||||| ||||||| |||||||| ||||| Sbjct: 7679 tcctaacgtctcagggctcagcgttctggatagattgaagtatgaattggcattaaataa 7620 Query: 704 gaccgaaggac-attgac-agagtca-gcctgagtatttgtctcg-gacatc-aagaaag 758 ||||||||||| |||||| |||| | || ||||||||||||||| ||||| ||||||| Sbjct: 7619 gaccgaaggacaattgacaagagcaaggcatgagtatttgtctcgaaacatcaaagaaag 7560 Query: 759 agattag-aagaac-ttatc-atcagattcg-taaaggata-gtacaacattaataa--c 811 |||| || |||||| ||||| |||||||||| ||||||||| ||||||||||||||| Sbjct: 7559 agataagaaagaactttatcaatcagattcgttaaaggataggtacaacattaataaaca 7500 Query: 812 tgctccagcttacatttgtagaa 834 ||||| |||||||| |||||||| Sbjct: 7499 tgctcaagcttacaattgtagaa 7477 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5761 Number of Sequences: 1807 Number of extensions: 5761 Number of successful extensions: 33 Number of sequences better than 1.0e-20: 1 length of query: 888 length of database: 10,358,551 effective HSP length: 16 effective length of query: 872 effective length of database: 10,329,639 effective search space: 9007445208 effective search space used: 9007445208 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)