BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC41ZA09RM1.SCF screened BAC_end
         (888 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1713                                                        1249   0.0  

>3x_Contig1713 
          Length = 18539

 Score = 1249 bits (630), Expect = 0.0
 Identities = 772/803 (96%), Gaps = 14/803 (1%)
 Strand = Plus / Minus

                                                                        
Query: 45   gctttagagctttctttgaatactcattacatcgacctaacgaagtatttcaccgaagct 104
            ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 8278 gctttagagctttctttgaatacgcattacatcgacctaacgaagtatttcaccgaagct 8219

                                                                        
Query: 105  tctcatgtcacggatatgattcatctgggtcatcattacgatggaaggttcttccgtggt 164
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8218 tctcatgtcacggatatgattcatctgggtcatcattacgatggaaggttcttccgtggt 8159

                                                                        
Query: 165  ggattatctcatagtgaagttagagccagattggatgccattattagagcctggttgcat 224
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8158 ggattatctcatagtgaagttagagccagattggatgccattattagagcctggttgcat 8099

                                                                        
Query: 225  ttcactgtttccaatgatcttactgcatggttagctcatggtactttgtacggttggctt 284
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8098 ttcactgtttccaatgatcttactgcatggttagctcatggtactttgtacggttggctt 8039

                                                                        
Query: 285  tacaacggattggcgttcacttgggatggtgatcatgacgttcaaatgcctattgctgat 344
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8038 tacaacggattggcgttcacttgggatggtgatcatgacgttcaaatgcctattgctgat 7979

                                                                        
Query: 345  ttaaaccgtatggcgaaaaaatttaacccaaaccgttatcgttgaggatcctactagagg 404
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 7978 ttaaaccgtatggcgaaaaaatttaa-ccaaaccgttatcgttgaggatcctactagagg 7920

                                                                        
Query: 405  aaacggtagatatttcctcgacgtgggtaccttcatcactgctaggaacaaggggaacgg 464
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7919 aaacggtagatatttcctcgacgtgggtaccttcatcactgctaggaacaaggggaacgg 7860

                                                                        
Query: 465  tttgaataacattgacgccagattcattgacgttgattctggtttgtacgttgatatcac 524
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7859 tttgaataacattgacgccagattcattgacgttgattctggtttgtacgttgatatcac 7800

                                                                        
Query: 525  cggtctttctgtatcttatgaaccaattgccgatagattcgaatggttagtccacaaata 584
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7799 cggtctttctgtatcttatgaaccaattgccgatagattcgaatggttagtccacaaata 7740

                                                                        
Query: 585  ttttaatgatttgaaaactgacccagaacatatgccattctacgaggaccctaacgttgt 644
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7739 ttttaatgatttgaaaactgacccagaacatatgccattctacgaggaccctaacgttgt 7680

                                                                        
Query: 645  tcctaacgtctcatggctcanncgtctggatagatttgagtatgatttggcatt-aataa 703
            ||||||||||||| ||||||    ||||||||||||  ||||||| |||||||| |||||
Sbjct: 7679 tcctaacgtctcagggctcagcgttctggatagattgaagtatgaattggcattaaataa 7620

                                                                        
Query: 704  gaccgaaggac-attgac-agagtca-gcctgagtatttgtctcg-gacatc-aagaaag 758
            ||||||||||| |||||| ||||  | || |||||||||||||||  ||||| |||||||
Sbjct: 7619 gaccgaaggacaattgacaagagcaaggcatgagtatttgtctcgaaacatcaaagaaag 7560

                                                                        
Query: 759  agattag-aagaac-ttatc-atcagattcg-taaaggata-gtacaacattaataa--c 811
            |||| || |||||| ||||| |||||||||| ||||||||| |||||||||||||||   
Sbjct: 7559 agataagaaagaactttatcaatcagattcgttaaaggataggtacaacattaataaaca 7500

                                   
Query: 812  tgctccagcttacatttgtagaa 834
            ||||| |||||||| ||||||||
Sbjct: 7499 tgctcaagcttacaattgtagaa 7477


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5761
Number of Sequences: 1807
Number of extensions: 5761
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 888
length of database: 10,358,551
effective HSP length: 16
effective length of query: 872
effective length of database: 10,329,639
effective search space: 9007445208
effective search space used: 9007445208
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)