BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC41ZB01FM1.SCF screened BAC_end (959 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1666 1166 0.0 >3x_Contig1666 Length = 16162 Score = 1166 bits (588), Expect = 0.0 Identities = 662/684 (96%), Gaps = 2/684 (0%) Strand = Plus / Minus Query: 86 tctgttcaaatcaagcatacccttatggaatacagatctggatggagccttaaggttgag 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12640 tctgttcaaatcaagcatacccttatggaatacagatctggatggagccttaaggttgag 12581 Query: 146 ataagtgatgctttcgatgctaaagttgttgaagctatagagttcttgttcaaacttctt 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12580 ataagtgatgctttcgatgctaaagttgttgaagctatagagttcttgttcaaacttctt 12521 Query: 206 cacttaaaattgattgacagctcaaagaattcctttaaaacatttaaagaaccagacatt 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12520 cacttaaaattgattgacagctcaaagaattcctttaaaacatttaaagaaccagacatt 12461 Query: 266 ttatttgcccattgggaaaacttgaaaaacttcggttgttatatatctggagcaagtaaa 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12460 ttatttgcccattgggaaaacttgaaaaacttcggttgttatatatctggagcaagtaaa 12401 Query: 326 gtaatcgcacagggttttgtcaacattactataagattgttgaaccgactacatctttac 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12400 gtaatcgcacagggttttgtcaacattactataagattgttgaaccgactacatctttac 12341 Query: 386 attatggaagagcaacgaaactcagtagacttagtaacttctgatgatgccagaaaatgg 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12340 attatggaagagcaacgaaactcagtagacttagtaacttctgatgatgccagaaaatgg 12281 Query: 446 gtagttgaagttatagaaaatgtcggtgctttcaagagaaagaccaatagattttcgaac 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12280 gtagttgaagttatagaaaatgtcggtgctttcaagagaaagaccaatagattttcgaac 12221 Query: 506 gtcttaacgatagcgttccaaaactctgttctttat-acatcaaggatcacagcatgctg 564 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 12220 gtcttaacgaaggcgttccaaaactctgttctttataacatcaaggatcacagcatgctg 12161 Query: 565 ctggagagacttaggattagtggacacttcttgatctacactggagggatcctataacaa 624 |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 12160 ctggagagacttaggaatagtggacacttcttgatctacactggagggatcctagaacaa 12101 Query: 625 aatgggattaatttaattgccagtgaagaacttttaggatgctttgatgatgaaataatg 684 ||||||||| |||||||||| ||||| || ||| ||||||||| |||||||||||||||| Sbjct: 12100 aatgggatttatttaattgcaagtgaggagcttctaggatgctctgatgatgaaataatg 12041 Query: 685 ggccttatcaaatctacttaaattgggtccgattttgtttcaaaagtttgaaattattat 744 | | |||||||||||||| |||| ||||||||||| || |||||| ||||||||| || Sbjct: 12040 gacattatcaaatctactaaaatagggtccgatttgattccaaaag-ttgaaattaataa 11982 Query: 745 tagtttaactttttacaaccctcc 768 |||||||||| ||||||||||||| Sbjct: 11981 tagtttaactatttacaaccctcc 11958 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 15,708 Number of Sequences: 1807 Number of extensions: 15708 Number of successful extensions: 191 Number of sequences better than 1.0e-20: 1 length of query: 959 length of database: 10,358,551 effective HSP length: 16 effective length of query: 943 effective length of database: 10,329,639 effective search space: 9740849577 effective search space used: 9740849577 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)