BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC41ZB03FM1.SCF screened BAC_end (953 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1531 1142 0.0 >3x_Contig1531 Length = 8774 Score = 1142 bits (576), Expect = 0.0 Identities = 687/717 (95%), Gaps = 6/717 (0%) Strand = Plus / Plus Query: 92 tggaagttctaatattgcttccactatcgtcaataaaatatgcattagagtattctccaa 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 tggaagttctaatattgcttccactatcgtcaataaaatatgcattagagtattctccaa 121 Query: 152 gtccagattgaagttttgccttttcgaatgctctgacatcgggcttacagactaagtcac 211 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 gtccagattgaagttttgccttttcgaatgctctgacatcgggcttacagactaagtcac 181 Query: 212 tttgcgagtaatcacagtaagttatcccatcaaatagatcagcaatacctaataaccgta 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 tttgcgagtaatcacagtaagttatcccatcaaatagatcagcaatacctaataaccgta 241 Query: 272 cacaacgtagtccatgattcttatatgcatttgtgaaaagccacatcttgtcaaaacatc 331 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 cacaacgtagtccatgattcttatatgcatttgtgaaaagccacatcttgtcaaaacatc 301 Query: 332 cactttctctgattcgttgcaatatctttctttgttcaggatccggtttcaaaatatctt 391 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 cactttctctgattcgttgcaatatctttctttgttcaggatccggtttcaaaatatctt 361 Query: 392 gaaggggcaacgaatcgtccactaattcattatattcaacggcatcgatttcatgatgat 451 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 gaaggggcaacgaatcgtccactaattcattatattcaacggcatcgatttcatgatgat 421 Query: 452 caacgagacctttaattgctagtccgtaggttctgtagtaattttctcttagctccctgg 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 caacgagacctttaattgctagtccgtaggttctgtagtaattttctcttagctccctgg 481 Query: 512 cagtttcattatccaggttgaacttcattttgaagtactgatgaatgggactg-tccatn 570 |||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||| Sbjct: 482 cagtttcattatccaggttgaacttcatttgaaagtactgatgaat-ggactgttccatt 540 Query: 571 tagtcatgaatcctttacgattttntataaaggcagttatctatatcatagaagaacacc 630 |||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 541 aagtcatgaatccttaacgattttttataaaggcagttatctatatcaaagaagaacacc 600 Query: 631 ctgagatttggatccggtttangaataagttgatctggatc-aatgtaacctttgattcc 689 |||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||| | Sbjct: 601 ttgagatttggatccggtttaggaataggttgatctggatcaaatgtaacctttgatccg 660 Query: 690 ggataag-taaagactcc-aatgctgtctggtgatgcgcaatttaatccttggttggaat 747 ||||||| |||||||||| ||||||||||| |||||||||||||| | ||| ||| ||| Sbjct: 661 ggataagttaaagactccaaatgctgtctgttgatgcgcaatttatcctttgtttgtaat 720 Query: 748 ggggatttccgaaaatgtagagtatgtcattctgaaaactggttctaaccttttttg 804 | | | |||||| ||||||||||||||||||||||||||| | ||||||||| |||| Sbjct: 721 gtgta-ttccgataatgtagagtatgtcattctgaaaactcgatctaaccttctttg 776 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8177 Number of Sequences: 1807 Number of extensions: 8177 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 953 length of database: 10,358,551 effective HSP length: 16 effective length of query: 937 effective length of database: 10,329,639 effective search space: 9678871743 effective search space used: 9678871743 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)