BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC41ZB04FM1.SCF screened BAC_end (966 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1737 983 0.0 >3x_Contig1737 Length = 17214 Score = 983 bits (496), Expect = 0.0 Identities = 551/564 (97%), Gaps = 4/564 (0%) Strand = Plus / Minus Query: 87 ttaacataagaggaactcaaaaacaaagcaggcgaccaataaggtcgggagccatataca 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11176 ttaacataagaggaactcaaaaacaaagcaggcgaccaataaggtcgggagccatataca 11117 Query: 147 gtcctttcctgtttggaaacctgcaagggccgtagaagaagttgggggtatttaaaatag 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11116 gtcctttcctgtttggaaacctgcaagggccgtagaagaagttgggggtatttaaaatag 11057 Query: 207 tctgtgagttttgttaatgtttgagatcacacttcaaacatgttcacaataattgatgga 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11056 tctgtgagttttgttaatgtttgagatcacacttcaaacatgttcacaataattgatgga 10997 Query: 267 aacacacaattggaatcaaaagggtatcgatcaatcaacgtagaattggttcaccttcaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10996 aacacacaattggaatcaaaagggtatcgatcaatcaacgtagaattggttcaccttcaa 10937 Query: 327 actctcgatttcataaacatcgtcaacacctgacttcacaataatggagccgatgttgtt 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10936 actctcgatttcataaacatcgtcaacacctgacttcacaataatggagccgatgttgtt 10877 Query: 387 acctgtggagaagaagaaagtgttagtggaagtgacagtaccgttattgaagtaaagttc 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10876 acctgtggagaagaagaaagtgttagtggaagtgacagtaccgttattgaagtaaagttc 10817 Query: 447 gataatgtttctgtcaacgataccattaacatcgaaggtgctagaattactagaaggtgg 506 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10816 gataatgtttctgtcaacgataccataaacatcgaaggtgctagaattactagaaggtgg 10757 Query: 507 attggctactgagagtctttgagtgaagaatgggttctcttgaacgaatgggatgtttgg 566 |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 10756 attgctaactgagagtctttgagtgaagaatgggttctcttgaacgaatgggatg-ttgg 10698 Query: 567 aatgaccacggttccagaagaaatgcttggaattaaccttcgtagcctaatcttaagtat 626 |||||||||||| | ||||||| ||||||||||| | |||||||||||||||| |||||| Sbjct: 10697 aatgaccacggtccaagaagaattgcttggaatt-agcttcgtagcctaatctcaagtat 10639 Query: 627 tcgtccgctgtcccttgtcacctt 650 |||| |||||| |||||||||||| Sbjct: 10638 tcgt-cgctgt-ccttgtcacctt 10617 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8245 Number of Sequences: 1807 Number of extensions: 8245 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 966 length of database: 10,358,551 effective HSP length: 16 effective length of query: 950 effective length of database: 10,329,639 effective search space: 9813157050 effective search space used: 9813157050 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)