BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC41ZB06RM1.SCF screened BAC_end (955 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1634 1209 0.0 >3x_Contig1634 Length = 14275 Score = 1209 bits (610), Expect = 0.0 Identities = 855/911 (93%), Gaps = 20/911 (2%) Strand = Plus / Plus Query: 49 atagacaaaagaaagccaaggagttcatccaagagcaagagagaaaagctaggctcgagg 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12759 atagacaaaagaaagccaaggagttcatccaagagcaagagagaaaagctaggctcgagg 12818 Query: 109 aaagggccaagatcagagcagataaaaaaaaggctcttgagaaacagcttgaagatttta 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12819 aaagggccaagatcagagcagataaaaaaaaggctcttgagaaacagcttgaagatttta 12878 Query: 169 aacaggcgatgaaagatgtcggtgattatgtcggtgtagaggacgacgacgaataagccg 228 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 12879 aacaggcgatgaaagatgtcggtgattatgtcggtgtagaggacgacgacgaagaagccg 12938 Query: 229 aaaatgggaaacagggaagcgatgaagaggctgaagaatggacgggattttccgatgata 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12939 aaaatgggaaacagggaagcgatgaagaggctgaagaatggacgggattttccgatgata 12998 Query: 289 acggagatgcaactgaagaagaagaagaggattctgactctgttagtgtgaaaccgatct 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12999 acggagatgcaactgaagaagaagaagaggattctgactctgttagtgtgaaaccgatct 13058 Query: 349 taaagaaatatgtacagacttacttagatgatactacggtagacatcgaacccttagagc 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13059 taaagaaatatgtacagacttacttagatgatactacggtagacatcgaacccttagagc 13118 Query: 409 ccaatgacaattttgagtaccttgcggaattaaataatgtgaagttagagaaatcggaac 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13119 ccaatgacaattttgagtaccttgcggaattaaataatgtgaagttagagaaatcggaac 13178 Query: 469 aaattttagatcaaagcatcgaacgtgcgaagaaatatgcaaagtttttgggagttgaag 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13179 aaattttagatcaaagcatcgaacgtgcgaagaaatatgcaaagtttttgggagttgaag 13238 Query: 529 aaaaatctggtaataagagtaaaaagaataagaagttcagatacttgaccaagatcgaga 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 13239 aaaaatctggtaataagagtaaaaagaataagaagttcagatacttgaccaagaacgaga 13298 Query: 589 gatgacataatcaaagaaaggcccaacataataaacgtaggaaagtattaaccttttttt 648 || |||| ||||||||||||||| | |||||||||||||||| |||||||||||||| Sbjct: 13299 gaagacaaaatcaaagaaaggccaacaataataaacgtaggaagtaattaaccttttttt 13358 Query: 649 tttaatttatttatctnncctctctttctaaaacatctcattcatccatttttccccccc 708 ||| ||||| |||||| ||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 13359 ttt-attta-ttatct-tcctctctttct-aaacatctcattcatcca-ttttccccccc 13413 Query: 709 tctgttggttgcnnatgtattctacctncgacttttaagaatnanccaaatccatctttc 768 |||||| ||||| ||||||||||||| ||||||| |||||| | ||||||||||| ||| Sbjct: 13414 tctgtt-gttgc-aatgtattctacct-cgactttaaagaat-aaccaaatccatc-ttc 13468 Query: 769 tgattatcttctaaaattttgtaccaaaagaatgtttatttccccattaaattcagaagt 828 |||||||| |||||||||| |||||||| ||||||| |||||||| |||| ||| ||| Sbjct: 13469 tgattatc-tctaaaatttgtaaccaaaag-atgtttaattccccataaaatacag-agt 13525 Query: 829 gcccactggttttact-ccaggaccatccgcatttc-aaattaaatcgggcgcc-tagcg 885 ||||||| | | |||| |||| ||||| || || || |||| |||||| ||||| ||||| Sbjct: 13526 gcccact-gatatactcccagaaccatacgaatctcaaaataaaatcgagcgccatagcg 13584 Query: 886 cttttattcc-cgcatttttcccgttcaacaaaatgc-tctttaaagaccgtcc-ctttt 942 || | || || ||||||||||| || ||||||||||| |||| ||||||||||| |||| Sbjct: 13585 ctataataccacgcatttttccggtacaacaaaatgcttcttaaaagaccgtccgctttg 13644 Query: 943 gtactactatt 953 |||||||||| Sbjct: 13645 ttactactatt 13655 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9711 Number of Sequences: 1807 Number of extensions: 9711 Number of successful extensions: 158 Number of sequences better than 1.0e-20: 1 length of query: 955 length of database: 10,358,551 effective HSP length: 16 effective length of query: 939 effective length of database: 10,329,639 effective search space: 9699531021 effective search space used: 9699531021 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)