BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC41ZB12RM1.SCF screened BAC_end (943 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1697 1261 0.0 >3x_Contig1697 Length = 16220 Score = 1261 bits (636), Expect = 0.0 Identities = 683/698 (97%), Gaps = 1/698 (0%) Strand = Plus / Minus Query: 46 gcttgacaaaactaaacgatattaacgataagcagatcactggacccagatactggtact 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10471 gcttgacaaaactaaacgatattaacgataagcagatcactggacccagatactggtact 10412 Query: 106 ctgcacagcgcgagatatatctatatctatatatatatatatatatattcacacaagaat 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10411 ctgcacagcgcgagatatatctatatctatatatatatatatatatattcacacaagaat 10352 Query: 166 agaacaagataatcacatcacgtgacaagagctgtacctcttccagctaaactagcagac 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10351 agaacaagataatcacatcacgtgacaagagctgtacctcttccagctaaactagcagac 10292 Query: 226 aataacttctaacaagcgcaggcgcttgatattttctagcactgggttgtaacagatgca 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10291 aataacttctaacaagcgcaggcgcttgatattttctagcactgggttgtaacagatgca 10232 Query: 286 gagaatgcgaatacaaatacaactactatccaaacactcttacacaagcaaacactgccc 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10231 gagaatgcgaatacaaatacaactactatccaaacactcttacacaagcaaacactgccc 10172 Query: 346 tgtacttagcagtcttttggtctgcttgctccaactcagtccttgcctagcagaatttcg 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10171 tgtacttagcagtcttttggtctgcttgctccaactcagtccttgcctagcagaatttcg 10112 Query: 406 ggaatttgtcttcggcacaaacatgaagtaaaaaaaaaaaggcgaacccagcaaaaacca 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10111 ggaatttgtcttcggcacaaacatgaagtaaaaaaaaaaaggcgaacccagcaaaaacca 10052 Query: 466 gtattcatgcgacgagatgttattcctgcatgtttggatcgtttcaaaagtgcaatgttt 525 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 10051 gtattcatgcgacgagatgttattcctgcatgtttggaacgtttcaaaagtgcaatgttt 9992 Query: 526 ctccgacgtttgtcaggagacttgcattgacaagtgttattcttgttttgtttggttgag 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9991 ctccgacgtttgtcaggagacttgcattgacaagtgttattcttgttttgtttggttgag 9932 Query: 586 gggctttctgttacactatgtcgatctgtttatccatgtttcaagttccgccagttgtgg 645 || || ||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9931 ggctttcctgttacactatgtcgatctgtttatccatgtttcaagttccgccagttgt-g 9873 Query: 646 tagtttcccgtgcgncaacatgatacgaagagcgaatggttaactaagttaaacctgcat 705 || |||| ||||| |||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 9872 taagttccggtgcgcaaacatgatacgaagagcgaatggtaaactaagttaaacttgcat 9813 Query: 706 gaaagtttacgcanggattttgtgctgctactgctggg 743 || |||||||||| ||||||||||||||||||||||| Sbjct: 9812 gagagtttacgcagtgattttgtgctgctactgctggg 9775 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 29,752 Number of Sequences: 1807 Number of extensions: 29752 Number of successful extensions: 5975 Number of sequences better than 1.0e-20: 1 length of query: 943 length of database: 10,358,551 effective HSP length: 16 effective length of query: 927 effective length of database: 10,329,639 effective search space: 9575575353 effective search space used: 9575575353 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)