BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC41ZC03RM1.SCF screened BAC_end (974 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1687 1402 0.0 >3x_Contig1687 Length = 12800 Score = 1402 bits (707), Expect = 0.0 Identities = 794/813 (97%), Gaps = 8/813 (0%) Strand = Plus / Minus Query: 49 tgagggaatcatcccatgagggcaagaaaagtaagacaaagagatcacataaagatggaa 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4103 tgagggaatcatcccatgagggcaagaaaagtaagacaaagagatcacataaagatggaa 4044 Query: 109 aagatgagtacacgttgttcttggaaaagaagttgaaatatctagaaaaattagttgaca 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4043 aagatgagtacacgttgttcttggaaaagaagttgaaatatctagaaaaattagttgaca 3984 Query: 169 tgaaaccagatacgaactcgtataaagagaaactcagcaaatacaagaaggttgctcatc 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3983 tgaaaccagatacgaactcgtataaagagaaactcagcaaatacaagaaggttgctcatc 3924 Query: 229 ttttggacaacggagaacctgatcaggatgatataacaactgtgcttcctcccacggcgg 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3923 ttttggacaacggagaacctgatcaggatgatataacaactgtgcttcctcccacggcgg 3864 Query: 289 cacaacaaactgcaccttctaatacacttgctgcttcgctatcacagcagccgaatgggg 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3863 cacaacaaactgcaccttctaatacacttgctgcttcgctatcacagcagccgaatgggg 3804 Query: 349 cagcaggggtagctcaggatcaacagataacgaggattaggtcacctatactacctccgc 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3803 cagcaggggtagctcaggatcaacagataacgaggattaggtcacctatactacctccgc 3744 Query: 409 ctccgaaaactaagtttttacctctacatcaacagtctcaaaatcaaccacaacgttctg 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3743 ctccgaaaactaagtttttacctctacatcaacagtctcaaaatcaaccacaacgttctg 3684 Query: 469 gcatgattaagcctcctcattctcatgaacgagcattggaatccttagcatctgattctc 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3683 gcatgattaagcctcctcattctcatgaacgagcattggaatccttagcatctgattctc 3624 Query: 529 tcgaatcaatcgattattcacgttgcattttcgcaaaatacaacttgaaagagttcttgt 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3623 tcgaatcaatcgattattcacgttgcattttcgcaaaatacaacttgaaagagttcttgt 3564 Query: 589 catatgatccagctttcgaatttgatgaacaantgagtagagcgtttttggacacctact 648 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3563 catatgatccagctttcgaatttgatgaacaattgagtagagcgtttttggacacctact 3504 Query: 649 ttacaagtaactc-attc-natatccacttctagatgaacaagagatttacactttccac 706 ||||||| | || |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 3503 ttacaag-acttcaattcaaatatccacttctagatgaacaagagatttacactttccac 3445 Query: 707 aatgattatattaataataatgttcactcatattcaatcaatgaattccattttctcctg 766 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 3444 aatgattatattaataataatgttcactcatattcaatcaatgaattcca-tttctcctg 3386 Query: 767 tggtagaatgtggttaggttttcaacattttaaccccatttacaacagaccactggaaaa 826 |||||||||||||||| ||||||| || ||| | |||||||||| |||||||||||||| Sbjct: 3385 tggtagaatgtggtta-gttttcagca-tttcagcccatttacacaagaccactggaaaa 3328 Query: 827 ttccaaggggttgccttcaaataagatatttct 859 | || ||||||||||| ||||| |||||||||| Sbjct: 3327 tacc-aggggttgcctccaaat-agatatttct 3297 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7238 Number of Sequences: 1807 Number of extensions: 7238 Number of successful extensions: 60 Number of sequences better than 1.0e-20: 1 length of query: 974 length of database: 10,358,551 effective HSP length: 16 effective length of query: 958 effective length of database: 10,329,639 effective search space: 9895794162 effective search space used: 9895794162 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)