BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC41ZC04FM1.SCF screened BAC_end (946 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig187 979 0.0 >3x_Contig187 Length = 1332 Score = 979 bits (494), Expect = 0.0 Identities = 512/518 (98%) Strand = Plus / Plus Query: 90 ctttatcataaatgacccatcaacacctttatccgccccgactaatagaatattggagcg 149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 589 ctttatcataaatgacccatcaacacctttatccgccccgactaatagaatattggagcg 648 Query: 150 agtattcttcgagaggaagtcacttatttcccagggttgttctttcatgattgtcaagat 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 649 agtattcttcgagaggaagtcacttatttcccagggttgttctttcatgattgtcaagat 708 Query: 210 catttgtgataatccatctttcgcatctccgacaagtaaaccctccttaaactcagtaaa 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 709 catttgtgataatccatctttcgcatctccgacaagtaaaccctccttaaactcagtaaa 768 Query: 270 tcgttcggatagttgcggttgcgtcctgagaaggtctatattcgatctgatcattttcca 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 769 tcgttcggatagttgcggttgcgtcctgagaaggtctatattcgatctgatcattttcca 828 Query: 330 ctcttcgactgttcgtgtactttccattgaatacatctggagttccattaaacgtgcggc 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 829 ctcttcgactgttcgtgtactttccattgaatacatctggagttccattaaacgtgcggc 888 Query: 390 aaaagagagcctatcattctctaaaaacattgggccaaaagcacaaaacattaagcggat 449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 889 aaaagagagcctatcattctctaaaaacattgggccaaaagcacaaaacattaagcggat 948 Query: 450 tagtacagacaaaattttattcggtttattgggcttgctgttaacaagttcgtctgaatt 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 949 tagtacagacaaaattttattcggtttattgggcttgctgttaacaagttcgtctgaatt 1008 Query: 510 ttcaagtacgtaccgaaatactgtcaaaaactcattcacttcaacatcataaaaccaatg 569 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1009 ttcaagtacgtaccgaaatactgtcaaaaactcattcacttcaacatcataaaaccaatt 1068 Query: 570 ctttttgatacgcacccattctaaaagctcgaatatct 607 |||||| |||| |||||||||||| | ||| ||||||| Sbjct: 1069 cttttttatactcacccattctaatatctctaatatct 1106 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6030 Number of Sequences: 1807 Number of extensions: 6030 Number of successful extensions: 35 Number of sequences better than 1.0e-20: 1 length of query: 946 length of database: 10,358,551 effective HSP length: 16 effective length of query: 930 effective length of database: 10,329,639 effective search space: 9606564270 effective search space used: 9606564270 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)