BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC41ZC04RM1.SCF screened BAC_end (898 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1801 1166 0.0 >3x_Contig1801 Length = 57606 Score = 1166 bits (588), Expect = 0.0 Identities = 638/648 (98%), Gaps = 5/648 (0%) Strand = Plus / Minus Query: 44 gcttttgttgacaactttctcatttttccatgttgcaaaagaatttggatggaaacagcc 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35768 gcttttgttgacaactttctcatttttccatgttgcaaaagaatttggatggaaacagcc 35709 Query: 104 atttacgaagtcttgagatcatagaaactgagatgcgatgagatgagataggaaaactta 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35708 atttacgaagtcttgagatcatagaaactgagatgcgatgagatgagataggaaaactta 35649 Query: 164 tgaaaaatccgtagtaggtagcaccattcacttggtttgatagtatatataagactgcta 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35648 tgaaaaatccgtagtaggtagcaccattcacttggtttgatagtatatataagactgcta 35589 Query: 224 gtccgtacctgctgatcggatggttatgtagggtgggaggaagggagataaaaatgcaac 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35588 gtccgtacctgctgatcggatggttatgtagggtgggaggaagggagataaaaatgcaac 35529 Query: 284 tatacactttattctttgatctgttcttccggatctgtatattgagatagatcgagatcg 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35528 tatacactttattctttgatctgttcttccggatctgtatattgagatagatcgagatcg 35469 Query: 344 tctcttttttgtaggtaatggatcagtagcgatacaattccgctgcttatcgaagtagcc 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35468 tctcttttttgtaggtaatggatcagtagcgatacaattccgctgcttatcgaagtagcc 35409 Query: 404 atcaatgcgtagcatccattagtaaacttgggggccattgatgtggagtagaacagtaga 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35408 atcaatgcgtagcatccattagtaaacttgggggccattgatgtggagtagaacagtaga 35349 Query: 464 gaccaccaagcgttgaccgcaccagagaacatattcattgatgctaggacaatggctctt 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35348 gaccaccaagcgttgaccgcaccagagaacatattcattgatgctaggacaatggctctt 35289 Query: 524 tcttgaagatcaccacggcatacaacgttgcaccatgcaaagaagagagtttgaccagtg 583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35288 tcttgaagatcaccacggcatacaacgttgcaccatgcaaagaagagagtttgaccagtg 35229 Query: 584 taagaaattccttcccaagt-ttgagcagcgaacataaacttcgggtttaatggggttcg 642 ||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 35228 taagaaattcc-tcccaagtattgagcagcgaacataaacttcgggtttaat-gggttcg 35171 Query: 643 tc-agatcatttgagaaacattgaacttgg-tttactgatgaaaaggg 688 || |||||| | |||||||| ||||| ||| | ||||||||||||||| Sbjct: 35170 tcaagatcaatagagaaacaatgaacatggatatactgatgaaaaggg 35123 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6467 Number of Sequences: 1807 Number of extensions: 6467 Number of successful extensions: 241 Number of sequences better than 1.0e-20: 1 length of query: 898 length of database: 10,358,551 effective HSP length: 16 effective length of query: 882 effective length of database: 10,329,639 effective search space: 9110741598 effective search space used: 9110741598 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)