BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC41ZD04FM1.SCF screened BAC_end (915 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig185 961 0.0 >3x_Contig185 Length = 1072 Score = 961 bits (485), Expect = 0.0 Identities = 501/504 (99%), Gaps = 2/504 (0%) Strand = Plus / Plus Query: 88 taagcaaagcgagaatctttcactggattacagagatatgatggggaaacatactccgtg 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97 taagcaaagcgagaatctttcactggattacagagatatgatggggaaacatactccgtg 156 Query: 148 cgggctgcaaagagtgaatagggtaaaaaaaaagaactcaattcaacggagttgagttcg 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 157 cgggctgcaaagagtgaatagggtaaaaaaaaagaactcaattcaacggagttgagttcg 216 Query: 208 aactttaaaaatttgaccattagcccctgtgatccaatagcatgtagcgtgtaaactccg 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 aactttaaaaatttgaccattagcccctgtgatccaatagcatgtagcgtgtaaactccg 276 Query: 268 taggataatggtctaatggttttcgacccggtcattccagtgtggatcttttacaaaaca 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 taggataatggtctaatggttttcgacccggtcattccagtgtggatcttttacaaaaca 336 Query: 328 gcagttgtttccagggatgttgagttacgttgtatctttcgataatatccctataattct 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 337 gcagttgtttccagggatgttgagttacgttgtatctttcgataatatccctataattct 396 Query: 388 cggtatgtatttcattttttttttgatcattcatttttttccttcattgtttacgttatt 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 cggtatgtatttcattttttttttgatcattcatttttttccttcattgtttacgttatt 456 Query: 448 ttgactgaggaaaacaactggctc-anaatgagtgacaagatcattcaaattcgttagta 506 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 457 ttgactgaggaaaacaactggctcaaaaatgagtgacaagatcattcaaattcgttagta 516 Query: 507 gtggtgataggtttcagtttattgttttgtaaaaaagagacttgtttcaattgaatataa 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 517 gtggtgataggtttcagtttattgttttgtaaaaaagagacttgtttcaattgaatataa 576 Query: 567 aa-ggggcctgtaatttctttaaa 589 || ||||||||||||||||||||| Sbjct: 577 aagggggcctgtaatttctttaaa 600 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 16,241 Number of Sequences: 1807 Number of extensions: 16241 Number of successful extensions: 214 Number of sequences better than 1.0e-20: 1 length of query: 915 length of database: 10,358,551 effective HSP length: 16 effective length of query: 899 effective length of database: 10,329,639 effective search space: 9286345461 effective search space used: 9286345461 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)