BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC41ZE05FM1.SCF screened BAC_end (926 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1602 244 3e-64 >3x_Contig1602 Length = 12694 Score = 244 bits (123), Expect = 3e-64 Identities = 141/146 (96%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 703 ccattgcgctttgcaaacgatctattaaaagttacaaataatggcacagataccgatgtc 762 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 12686 ccattgcgctttgcaaacgatctattaaaagttacaaataatggcacagatacggatgtc 12627 Query: 763 ttggacctgaagacgtgtgtgaagagatgctcgtatgatctcncag-attagacagaaga 821 |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 12626 ttggacctgaagacgtgtgtgaagagatgctcgtatgatctccaagaattagacagaaga 12567 Query: 822 attgaaggtgctatcaagaacaaccc 847 ||||||||||||||||||| |||||| Sbjct: 12566 attgaaggtgctatcaagaccaaccc 12541 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6059 Number of Sequences: 1807 Number of extensions: 6059 Number of successful extensions: 52 Number of sequences better than 1.0e-20: 1 length of query: 926 length of database: 10,358,551 effective HSP length: 16 effective length of query: 910 effective length of database: 10,329,639 effective search space: 9399971490 effective search space used: 9399971490 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)