BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC41ZE11FM1.SCF screened BAC_end (934 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1517 1243 0.0 >3x_Contig1517 Length = 8289 Score = 1243 bits (627), Expect = 0.0 Identities = 727/755 (96%), Gaps = 4/755 (0%) Strand = Plus / Plus Query: 87 tgaatcatctttggacctgctcatgtatggcaattgagctatgttccatactcccccatt 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5361 tgaatcatctttggacctgctcatgtatggcaattgagctatgttccatactcccccatt 5420 Query: 147 ttctaatgcttctttcgatactaaacaatccatcactgaatcttatcgcgatagtttgaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5421 ttctaatgcttctttcgatactaaacaatccatcactgaatcttatcgcgatagtttgaa 5480 Query: 207 ttcgacgatttccaataatagcgatgcaaagaaaccgaatgtcatgcttcaaactgccag 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5481 ttcgacgatttccaataatagcgatgcaaagaaaccgaatgtcatgcttcaaactgccag 5540 Query: 267 cacatcggcacctccatcaccagaactaccaatagaatcttcagaatccaatgatgattt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5541 cacatcggcacctccatcaccagaactaccaatagaatcttcagaatccaatgatgattt 5600 Query: 327 gattcccattgctagtatacctgatgaattgatgaaattgattgatttgttcattgatga 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5601 gattcccattgctagtatacctgatgaattgatgaaattgattgatttgttcattgatga 5660 Query: 387 tttgaaacagcctaaatattccaggcctttaatgattacacaattatctcagatattcca 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5661 tttgaaacagcctaaatattccaggcctttaatgattacacaattatctcagatattcca 5720 Query: 447 aaggttttatgagagatttgatagatcttgccaacaacattttaatgcattagcctcgcc 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5721 aaggttttatgagagatttgatagatcttgccaacaacattttaatgcattagcctcgcc 5780 Query: 507 tggaagtgtgaatgttatgctcaacgcgagagatacgagatatagtggattgagtagtat 566 ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| Sbjct: 5781 tggaagtgtgaatgttatgctcaacgcgagagaaacgagaaatagtggattgagtagtat 5840 Query: 567 ctttcacagatccagaagtagtagttttcgaaatagcagcataagaacaagaactagaac 626 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5841 cttcaacagatccagaagtagtagttttcgaaatagcagcataagaacaagaactagaac 5900 Query: 627 tatttctgaacagaattatcagcaattgttgactccagaagaaat-tcccatcaaattta 685 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 5901 taattctgaacagaattatcagcaattgttgactccagaagaaatatcccatcaaattaa 5960 Query: 686 gctgcaagaggcctatattttcaaaacggaccagattatggatttgtgtggaatgcgaaa 745 |||||||||||| ||| | ||||||||||||||||||||||||||||| |||||||||| Sbjct: 5961 gctgcaagaggctaataatatcaaaacggaccagattatggatttgtgt-gaatgcgaaa 6019 Query: 746 ttttcaag-aaatactggcagttggcacctgggttcccaatcttcccacaagaaaggcga 804 | |||||| |||||||| ||||||||| || || || |||| ||| |||||| |||||| Sbjct: 6020 tattcaagaaaatactgcaagttggcacttgtgtcccaaatcatccaacaagacaggcga 6079 Query: 805 aattcaactatttcaaaggaatggaaaatgacaag 839 || || |||| ||| || ||||||||||||||||| Sbjct: 6080 aa-tcgactagttcgaatgaatggaaaatgacaag 6113 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7855 Number of Sequences: 1807 Number of extensions: 7855 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 934 length of database: 10,358,551 effective HSP length: 16 effective length of query: 918 effective length of database: 10,329,639 effective search space: 9482608602 effective search space used: 9482608602 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)