BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC41ZF07FM1.SCF screened BAC_end (929 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig17 1197 0.0 3x_Contig1762 107 4e-23 3x_Contig1623 103 6e-22 3x_Contig1487 100 1e-20 >3x_Contig17 Length = 819 Score = 1197 bits (604), Expect = 0.0 Identities = 607/608 (99%) Strand = Plus / Plus Query: 87 cgctaggctattaacccaaagcgagaatcataccactagaccacacgccctaatttatga 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 cgctaggctattaacccaaagcgagaatcataccactagaccacacgccctaatttatga 268 Query: 147 aaactgaaaagcgtcatcttgttacattgaaaatgcagtaccataacttatgagtatgca 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 aaactgaaaagcgtcatcttgttacattgaaaatgcagtaccataacttatgagtatgca 328 Query: 207 ttacctgattttgccaaaagatgacgtttaaaaattaaggttggattcactgccaactgt 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329 ttacctgattttgccaaaagatgacgtttaaaaattaaggttggattcactgccaactgt 388 Query: 267 taagatcgatgttgaattatcatcaatggcaagcaaacaaagatattccaccaaataagg 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 taagatcgatgttgaattatcatcaatggcaagcaaacaaagatattccaccaaataagg 448 Query: 327 cacttcaaaataacagttatgaaacgggtattttggttgttatgtccagttttattttta 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 cacttcaaaataacagttatgaaacgggtattttggttgttatgtccagttttattttta 508 Query: 387 gctccctatgttttgccgatttcacttggaacagctgataaagatggaatactgaacgta 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 509 gctccctatgttttgccgatttcacttggaacagctgataaagatggaatactgaacgta 568 Query: 447 tattttgttaagtttggttggttttggacatcggtaatatcatgcttatgtgtgataagg 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 tattttgttaagtttggttggttttggacatcggtaatatcatgcttatgtgtgataagg 628 Query: 507 tactctaatatagtcaaccattggaaaaggtacctgctattaacgttatggtggatgata 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 629 tactctaatatagtcaaccattggaaaaggtacctgctattaacgttatggtggatgata 688 Query: 567 tttacccaagaagtatttggattgacgccgctaatggatctagtgttccttaacagcgga 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 tttacccaagaagtatttggattgacgccgctaatggatctagtgttccttaacagcgga 748 Query: 627 agaatttgttcatttgacatatttagtacagatggcaatgaacagacactgaatttgcaa 686 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 ggaatttgttcatttgacatatttagtacagatggcaatgaacagacactgaatttgcaa 808 Query: 687 ttccatga 694 |||||||| Sbjct: 809 ttccatga 816 >3x_Contig1762 Length = 22098 Score = 107 bits (54), Expect = 4e-23 Identities = 54/54 (100%) Strand = Plus / Minus Query: 87 cgctaggctattaacccaaagcgagaatcataccactagaccacacgccctaat 140 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6159 cgctaggctattaacccaaagcgagaatcataccactagaccacacgccctaat 6106 >3x_Contig1623 Length = 14379 Score = 103 bits (52), Expect = 6e-22 Identities = 52/52 (100%) Strand = Plus / Plus Query: 87 cgctaggctattaacccaaagcgagaatcataccactagaccacacgcccta 138 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7079 cgctaggctattaacccaaagcgagaatcataccactagaccacacgcccta 7130 >3x_Contig1487 Length = 9002 Score = 99.6 bits (50), Expect = 1e-20 Identities = 50/50 (100%) Strand = Plus / Plus Query: 87 cgctaggctattaacccaaagcgagaatcataccactagaccacacgccc 136 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5403 cgctaggctattaacccaaagcgagaatcataccactagaccacacgccc 5452 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6782 Number of Sequences: 1807 Number of extensions: 6782 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 4 length of query: 929 length of database: 10,358,551 effective HSP length: 16 effective length of query: 913 effective length of database: 10,329,639 effective search space: 9430960407 effective search space used: 9430960407 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)