BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC41ZG02FM1.SCF screened BAC_end (919 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1772 1249 0.0 >3x_Contig1772 Length = 25851 Score = 1249 bits (630), Expect = 0.0 Identities = 749/782 (95%), Gaps = 5/782 (0%) Strand = Plus / Minus Query: 86 tgcaaagtccaatttcttttctattttcaaaggtgggggtttctctgactcggaacgacc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18647 tgcaaagtccaatttcttttctattttcaaaggtgggggtttctctgactcggaacgacc 18588 Query: 146 tccgagaattcccgctatcatatccttgaaccaatcctccgttgagaatggatacaatgc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18587 tccgagaattcccgctatcatatccttgaaccaatcctccgttgagaatggatacaatgc 18528 Query: 206 atgtaaaggagagctgaaataattatcgagatgtatccatatgagcttcgcgggaggtag 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18527 atgtaaaggagagctgaaataattatcgagatgtatccatatgagcttcgcgggaggtag 18468 Query: 266 tagcatccttatatagttcaaaatttctgtttcttcgtcaagagaggcaggggtgttctc 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18467 tagcatccttatatagttcaaaatttctgtttcttcgtcaagagaggcaggggtgttctc 18408 Query: 326 gcttttcgattgtgttttatcagtcagcgactgctctcttgtttgccttacgttgttatc 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18407 gcttttcgattgtgttttatcagtcagcgactgctctcttgtttgccttacgttgttatc 18348 Query: 386 gcattgagttgcctcaaagtagccattgtgattttttgagattttggatccagaacttgt 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18347 gcattgagttgcctcaaagtagccattgtgattttttgagattttggatccagaacttgt 18288 Query: 446 tcttgactttggggaatcttcgtttgacttaattatagcacttgtattgataatttctgc 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18287 tcttgactttggggaatcttcgtttgacttaattatagcacttgtattgataatttctgc 18228 Query: 506 tagagaaggtctgtttgatcctttctcgtttgttaaaatgccatccaaattctcatcttt 565 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18227 tagagaaggtctgtttgatcctttctcgtttgttaaaatgccatccaaattctcatcttc 18168 Query: 566 aaggtactttcgagcaaattttgctctttgtgcttgattaccaacctcaaactccgaagt 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18167 aaggtactttcgagcaaattttgctctttgtgcttgattaccaacctcaaactccgaagt 18108 Query: 626 agagtcttttacagtgtctcttactccttctacatcattgttttcatcatctgttacatt 685 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18107 agagtctttaacagtgtctcttactccttctacatcattgttttcatcatctgttacatt 18048 Query: 686 agcactggcggctttttctggtatgttgctagttgagcactcattcgtggattttttaac 745 ||||||| || ||||||||| |||||||||||||||||||||| |||| | | ||| | Sbjct: 18047 agcactgtcgtctttttctgttatgttgctagttgagcactca-tcgttgtatatttcaa 17989 Query: 746 ccaataattttacgggcgtatcaatttcattttttgttccccacgaaacctt-ttttggc 804 ||||||| ||||||| ||||||| ||||| ||| ||||| |||||||| ||| ||||| Sbjct: 17988 ccaataaatttacggccgtatcagtttca-tttctgttcgccacgaaaacttcttttgca 17930 Query: 805 agtgctgggattttttcaaaaattggaatccttgcgggttttgtcccggccttataaatt 864 |||||||| || | ||| || ||| |||| ||||| |||| ||| || |||||||||||| Sbjct: 17929 agtgctggaatatattc-aagatttgaatacttgc-ggttctgtacccgccttataaatt 17872 Query: 865 gg 866 || Sbjct: 17871 gg 17870 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6599 Number of Sequences: 1807 Number of extensions: 6599 Number of successful extensions: 46 Number of sequences better than 1.0e-20: 1 length of query: 919 length of database: 10,358,551 effective HSP length: 16 effective length of query: 903 effective length of database: 10,329,639 effective search space: 9327664017 effective search space used: 9327664017 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)