BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC41ZG02FM1.SCF screened BAC_end
         (919 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1772                                                        1249   0.0  

>3x_Contig1772 
          Length = 25851

 Score = 1249 bits (630), Expect = 0.0
 Identities = 749/782 (95%), Gaps = 5/782 (0%)
 Strand = Plus / Minus

                                                                         
Query: 86    tgcaaagtccaatttcttttctattttcaaaggtgggggtttctctgactcggaacgacc 145
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18647 tgcaaagtccaatttcttttctattttcaaaggtgggggtttctctgactcggaacgacc 18588

                                                                         
Query: 146   tccgagaattcccgctatcatatccttgaaccaatcctccgttgagaatggatacaatgc 205
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18587 tccgagaattcccgctatcatatccttgaaccaatcctccgttgagaatggatacaatgc 18528

                                                                         
Query: 206   atgtaaaggagagctgaaataattatcgagatgtatccatatgagcttcgcgggaggtag 265
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18527 atgtaaaggagagctgaaataattatcgagatgtatccatatgagcttcgcgggaggtag 18468

                                                                         
Query: 266   tagcatccttatatagttcaaaatttctgtttcttcgtcaagagaggcaggggtgttctc 325
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18467 tagcatccttatatagttcaaaatttctgtttcttcgtcaagagaggcaggggtgttctc 18408

                                                                         
Query: 326   gcttttcgattgtgttttatcagtcagcgactgctctcttgtttgccttacgttgttatc 385
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18407 gcttttcgattgtgttttatcagtcagcgactgctctcttgtttgccttacgttgttatc 18348

                                                                         
Query: 386   gcattgagttgcctcaaagtagccattgtgattttttgagattttggatccagaacttgt 445
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18347 gcattgagttgcctcaaagtagccattgtgattttttgagattttggatccagaacttgt 18288

                                                                         
Query: 446   tcttgactttggggaatcttcgtttgacttaattatagcacttgtattgataatttctgc 505
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18287 tcttgactttggggaatcttcgtttgacttaattatagcacttgtattgataatttctgc 18228

                                                                         
Query: 506   tagagaaggtctgtttgatcctttctcgtttgttaaaatgccatccaaattctcatcttt 565
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 18227 tagagaaggtctgtttgatcctttctcgtttgttaaaatgccatccaaattctcatcttc 18168

                                                                         
Query: 566   aaggtactttcgagcaaattttgctctttgtgcttgattaccaacctcaaactccgaagt 625
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18167 aaggtactttcgagcaaattttgctctttgtgcttgattaccaacctcaaactccgaagt 18108

                                                                         
Query: 626   agagtcttttacagtgtctcttactccttctacatcattgttttcatcatctgttacatt 685
             ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18107 agagtctttaacagtgtctcttactccttctacatcattgttttcatcatctgttacatt 18048

                                                                         
Query: 686   agcactggcggctttttctggtatgttgctagttgagcactcattcgtggattttttaac 745
             ||||||| || ||||||||| |||||||||||||||||||||| |||| |  | ||| | 
Sbjct: 18047 agcactgtcgtctttttctgttatgttgctagttgagcactca-tcgttgtatatttcaa 17989

                                                                         
Query: 746   ccaataattttacgggcgtatcaatttcattttttgttccccacgaaacctt-ttttggc 804
             ||||||| ||||||| ||||||| ||||| ||| ||||| |||||||| ||| |||||  
Sbjct: 17988 ccaataaatttacggccgtatcagtttca-tttctgttcgccacgaaaacttcttttgca 17930

                                                                         
Query: 805   agtgctgggattttttcaaaaattggaatccttgcgggttttgtcccggccttataaatt 864
             |||||||| || | ||| || ||| |||| ||||| |||| ||| || ||||||||||||
Sbjct: 17929 agtgctggaatatattc-aagatttgaatacttgc-ggttctgtacccgccttataaatt 17872

               
Query: 865   gg 866
             ||
Sbjct: 17871 gg 17870


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6599
Number of Sequences: 1807
Number of extensions: 6599
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 919
length of database: 10,358,551
effective HSP length: 16
effective length of query: 903
effective length of database: 10,329,639
effective search space: 9327664017
effective search space used: 9327664017
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)