BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC41ZG06RM1.SCF screened BAC_end (922 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1591 1211 0.0 >3x_Contig1591 Length = 14045 Score = 1211 bits (611), Expect = 0.0 Identities = 725/752 (96%), Gaps = 9/752 (1%) Strand = Plus / Plus Query: 43 cttgagcctattatcctaactgtcattttattaacttgggattgtatctatacaatgaac 102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 670 cttgagcctattatcctaactgtcattttattaacttgggattgtatctatacaatgaac 729 Query: 103 tcccaatggaggtcccatttgaaaggtatcactgaacttttcaagaagatcaattcagga 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 730 tcccaatggaggtcccatttgaaaggtatcactgaacttttcaagaagatcaattcagga 789 Query: 163 aactcatcaaaagtgctaaatgtcgcgaaatgttggtttaaggttatggagacttttgca 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 790 aactcatcaaaagtgctaaatgtcgcgaaatgttggtttaaggttatggagacttttgca 849 Query: 223 agtattattaccgtgctaggtggtgcacttgttgaggaaacagacttggacgcgattttt 282 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 850 agtattagtaccgtgctaggtggtgcacttgttgaggaaacagacttggacgcgattttt 909 Query: 283 gatccatacgatttcca-gtatgtcgagtcgttgaagtctctaaatatcacaacctcgtt 341 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 910 gatccatacgatttccatgtatgtcgagtcgttgaagtctctaaatatcacaacctcgtt 969 Query: 342 gaatgagttcaatcttttacggggtcacaacgaagagtttgatcttgttatcaaagaggt 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 970 gaatgagttcaatcttttacggggtcacaacgaagagtttgatcttgttatcaaagaggt 1029 Query: 402 cttcaaaagtttgaacttgattaggtctttggagaagacaagcatggacgggaataaagg 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1030 cttcaaaagtttgaacttgattaggtctttggagaagacaagcatggacgggaataaagg 1089 Query: 462 tggaatgatcaataaaaacatagactatttactcttctttgactctcactctgaagccta 521 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1090 tggaatgatcaataaaaacatagactatttactcttctttgactctcactctgaagccta 1149 Query: 522 tatgaacaagctctcttatttcaagatacagatnatcatcgtggaaatttgat-agcagc 580 |||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||| Sbjct: 1150 tatgaacaagctctcttatttcaagatacagaaaatcatcgtggaaa-ttgataagcagc 1208 Query: 581 tttgatatcaattcattgacannattccgtgt-atacctgcangatatcaatcacattcc 639 || ||||||||||||||||| || | |||| ||||||||| |||||||||| ||| Sbjct: 1209 ttgaatatcaattcattgaca-aatccggtgtaatacctgcagataatcaatcaca-tcc 1266 Query: 640 ttct-acagcaaaatactagatcatgcaataggatcttgttactctaaaaaatggagatg 698 |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1267 ttctaacagcaaaatactagatcatgcaata-gatcttgttactctaaaaaatggagatg 1325 Query: 699 tctttgcgataagctggtatgatatttctcatcaaactc-agttcaatctttcttattga 757 || |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 1326 tcattgcgataagctggtatgatatttctcatcaaactcaagttctatctttcttattga 1385 Query: 758 atgttttactaaaaccaccgggtattccaaaa 789 |||||||||||||| || |||||||||||| Sbjct: 1386 ttgttttactaaaactacttggtattccaaaa 1417 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7221 Number of Sequences: 1807 Number of extensions: 7221 Number of successful extensions: 40 Number of sequences better than 1.0e-20: 1 length of query: 922 length of database: 10,358,551 effective HSP length: 16 effective length of query: 906 effective length of database: 10,329,639 effective search space: 9358652934 effective search space used: 9358652934 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)