BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC41ZG09FM1.SCF screened BAC_end (939 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1340 1074 0.0 >3x_Contig1340 Length = 7156 Score = 1074 bits (542), Expect = 0.0 Identities = 593/606 (97%), Gaps = 3/606 (0%) Strand = Plus / Plus Query: 86 taaagatcccattgaaaaaaagggcagaaattaaaatatccgggtaacgaaatatttatt 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4718 taaagatcccattgaaaaaaagggcagaaattaaaatatccgggtaacgaaatatttatt 4777 Query: 146 tcattaaaatcgatatactatttacttataatatacgtatagtttagtggtatagatcta 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4778 tcattaaaatcgatatactatttacttataatatacgtatagtttagtggtatagatcta 4837 Query: 206 tggtacagtggtgggtgtggtaataataatgatatcaaatcattaattctctagctcctt 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4838 tggtacagtggtgggtgtggtaataataatgatatcaaatcattaattctctagctcctt 4897 Query: 266 tttcaattccttggtgaaatcatcctctacttcgatatcgtcccagtcttcagcccaaag 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4898 tttcaattccttggtgaaatcatcctctacttcgatatcgtcccagtcttcagcccaaag 4957 Query: 326 gtttgaatcttttgttagatcttgtgaaacaggttgcgatggccaagaatcagctgggaa 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4958 gtttgaatcttttgttagatcttgtgaaacaggttgcgatggccaagaatcagctgggaa 5017 Query: 386 atcctcgaattcatcgtcatcctcaagagaagattttcttggttctttatttgacatctt 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5018 atcctcgaattcatcgtcatcctcaagagaagattttcttggttctttatttgacatctt 5077 Query: 446 ttcgcttgtacaacgctgatgtatcatgtcaaagtgtatatcatgggctgtatatatctt 505 |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| Sbjct: 5078 ttcgcttgtacaacgctgatgtatcaggtcaaagtgtatatcaggggctgtatatatctt 5137 Query: 506 gagtgaatctatatgtagtattacttataaggtttgccactatttcagacctttttgtag 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5138 gagtgaatctatatgtagtattacttataaggtttgccactatttcagacctttttgtag 5197 Query: 566 cttttggatgattgtttattggtccaggtaatgaaacggctttgacagcatataagaca- 624 ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 5198 cttttggatgattgtttattggtccgggtaatgaaacggctttgacagcataaaagacag 5257 Query: 625 gacacattgaagccaaacgcataggggtgtaaattcgttgtgcatagtgtatttattgca 684 |||||||||| |||||||||| |||| ||||| |||||||||| |||||| ||| |||| Sbjct: 5258 gacacattgaggccaaacgcaaagggtggtaaa-tcgttgtgcagagtgta-ttaatgca 5315 Query: 685 tcgcct 690 |||||| Sbjct: 5316 tcgcct 5321 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,455 Number of Sequences: 1807 Number of extensions: 14455 Number of successful extensions: 104 Number of sequences better than 1.0e-20: 1 length of query: 939 length of database: 10,358,551 effective HSP length: 16 effective length of query: 923 effective length of database: 10,329,639 effective search space: 9534256797 effective search space used: 9534256797 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)