BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC41ZG12RM1.SCF screened BAC_end (968 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1699 1074 0.0 >3x_Contig1699 Length = 18038 Score = 1074 bits (542), Expect = 0.0 Identities = 587/598 (98%), Gaps = 3/598 (0%) Strand = Plus / Minus Query: 48 ttgttataaatgcttgcttctatcagttgatgtgatatttctaggtattgaaacttaaag 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1971 ttgttataaatgcttgcttctatcagttgatgtgatatttctaggtattgaaacttaaag 1912 Query: 108 aggtacattgtctatatctattttaatttaatgttttacgtactgaactaaaaacaacat 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1911 aggtacattgtctatatctattttaatttaatgttttacgtactgaactaaaaacaacat 1852 Query: 168 tcgaaaggtagtcattgtttcatggccctcaatttgtaaaataatattggtctacgaatt 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1851 tcgaaaggtagtcattgtttcatggccctcaatttgtaaaataatattggtctacgaatt 1792 Query: 228 gtcttctaacatgttatccaaatacactgaaggagtaatagaagatgatttattgtgccc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1791 gtcttctaacatgttatccaaatacactgaaggagtaatagaagatgatttattgtgccc 1732 Query: 288 tttacttctgccctgtcttttttggttatcgagagtagtggaagctgttaaatcaattgt 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1731 tttacttctgccctgtcttttttggttatcgagagtagtggaagctgttaaatcaattgt 1672 Query: 348 tgaatccaccaatttgctcaaactggatttactcttttcatgcttatatgttcttctttc 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1671 tgaatccaccaatttgctcaaactggatttactcttttcatgcttatatgttcttctttc 1612 Query: 408 cggagatactgtgcgtgttggttccatcatctctggtgtatcgatagagactgctgattg 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1611 cggagatactgtgcgtgttggttccatcatctctggtgtatcgatagagactgctgattg 1552 Query: 468 gttcaag-tattgaacagtgtcgatctccgtttgttgttcataac-tccatcgtttgtga 525 ||||||| |||||||||||||||||||||||| | ||||||||| ||||||||| |||| Sbjct: 1551 gttcaagttattgaacagtgtcgatctccgttgttggttcataacttccatcgttggtga 1492 Query: 526 gatgtataaagatttcctcacacctgtataggctgcatcattagcatctactttttccag 585 ||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||| Sbjct: 1491 gatgtataaagatttcctcacacctgtattggctgcatcaatagcatctactctttccag 1432 Query: 586 tggattcatagattccagattggtattaccgatagatgattggtgttcctcctccgaa 643 ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1431 tggattcatagatcccagattggtattaccgatagatga-tggtgttcctcctccgaa 1375 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8690 Number of Sequences: 1807 Number of extensions: 8690 Number of successful extensions: 76 Number of sequences better than 1.0e-20: 1 length of query: 968 length of database: 10,358,551 effective HSP length: 16 effective length of query: 952 effective length of database: 10,329,639 effective search space: 9833816328 effective search space used: 9833816328 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)