BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC41ZH08FM1.SCF screened BAC_end
         (932 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig700                                                          406   e-113

>3x_Contig700 
          Length = 2125

 Score =  406 bits (205), Expect = e-113
 Identities = 205/205 (100%)
 Strand = Plus / Minus

                                                                       
Query: 85  tgcaattctgagattatcttttggaagaccaatttgttaccatttgtcaattttttaact 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tgcaattctgagattatcttttggaagaccaatttgttaccatttgtcaattttttaact 146

                                                                       
Query: 145 tttctataagtattacgaattcacatatactctttcatcacatttataatctcatatctg 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tttctataagtattacgaattcacatatactctttcatcacatttataatctcatatctg 86

                                                                       
Query: 205 tcatttgtatagtttagtctccactgggtacttcttcactttgcgatttgtattatacgt 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85  tcatttgtatagtttagtctccactgggtacttcttcactttgcgatttgtattatacgt 26

                                    
Query: 265 attctaagtataattttcagcagaa 289
           |||||||||||||||||||||||||
Sbjct: 25  attctaagtataattttcagcagaa 1


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7652
Number of Sequences: 1807
Number of extensions: 7652
Number of successful extensions: 65
Number of sequences better than 1.0e-20: 1
length of query: 932
length of database: 10,358,551
effective HSP length: 16
effective length of query: 916
effective length of database: 10,329,639
effective search space: 9461949324
effective search space used: 9461949324
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)